[Bioclusters] Any one need a job submitting Perl module for LSF
Malay
mbasu at mail.nih.gov
Wed Mar 16 23:09:13 EST 2005
This should be fun. I am right now talking to different guys who wrote
me that they have something written already for different schedulars.
Will come back as soon as something fruitful comes up. As you can
understand it's easy to write such a module but not easy to actually
debug and test it on different schedular platform. Let's see wheather we
can actually come up with something. How about starting a new project at
Bioinformatics.org? What do you guys say? Script for LSF, GridEngine and
PBS is already there with us. It needs some redesigning a refactoring.
We'll see what we can do about DRMAA.
Cheers,
-Malay
Andrew D. Fant wrote:
> In the absence of someone willing to do the rewrite, I certainly have
> users who would find this module useful.
>
> Andy
>
> Rayson Ho wrote:
>
>> If we can seperate the "intelligent" part and the LSF interface, it may
>> be more useful...
>>
>> And rewrite the LSF interface in DRMAA (DRMAA has the Perl bindings
>> already), then we can have it interface with Gridengine, Gridway,
>> PBSPro, or Condor.
>>
>> Rayson
>>
>>
>> --- Malay <mbasu at mail.nih.gov> wrote:
>>
>>> Hi All:
>>>
>>> Sometimes back I wrote a perl module for submitting jobs to LSF que.
>>> The module is moderately intelligent. In can start,modify,que,delete
>>> jobs
>>> in LSF. It can also blacklist problematic nodes on the fly, and and
>>> kill and restart jobs automatically.
>>>
>>> My question is does anyone need this type of module, in that case,
>>> I'll clean up the code and write a documentation for it and make it
>>> public.
>>>
>>> -Malay
>
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