[Biococoa-dev] Base test

[Koen van der Drift]

On Aug 14, 2004, at 5:40 PM, John Timmer wrote:

> Incidentally, I'm not going to implement the base class just yet (even 
> if we
> did know what we're calling it) - I'll get the DNA bases working first 
> and
> then figure out which methods would also apply to an amino acid and 
> move
> them up the inheritance chain.
>

I have made a start for the BCSequence class, which will take care of 
editing any sequence of BCUnit/BCWhatever objects. We just need to 
agree what to use for the base/unit name. Right now I am using 
'aminoAcid' because I just copy/pasted it from my protein app. Until we 
find a name I have uncommented the methods that use aminoacid.

I have commited them to cvs, so everyone can have a look and give 
feedback.

- Koen.