[Biococoa-dev] Translation issues

[Koen van der Drift]

John,

Have you looked at the bioperl code? They are doing translations, so it 
might be of help how to approach this. See eg this page:

http://doc.bioperl.org/releases/bioperl-1.4/Bio/Tools/CodonTable.html



- Koen.




On Aug 31, 2004, at 3:29 PM, John Timmer wrote:

> Okay, I've stopped coding for a little while, and thought about this.  
> I'm
> not entirely sure I can get things to work, but I think there may be a 
> way
> to implement things fairly efficiently once I add a couple of methods 
> to
> BCSequenceDNA.  If things work like I think they well, the biggest 
> advantage
> will probably be that it's easier to write an optimized form of the 
> matching
> method.
>
> I'll try to actually write the code tonight and tomorrow, and I'll run 
> some
> speed tests when it's done and let you know the results.
>
>
> JT
>
> _______________________________________________
> This mind intentionally left blank
>
>
> _______________________________________________
> Biococoa-dev mailing list
> Biococoa-dev at bioinformatics.org
> https://bioinformatics.org/mailman/listinfo/biococoa-dev
>