[Biococoa-dev] Sequence Structure

Alexander Griekspoor mek at mekentosj.com
Tue Jul 12 02:04:01 EDT 2005


Yes, very good point.. I think that indeed we can't have a codon  
sequence unless we map all codons to a unique char... which comes  
quite close to amino acids ;-)
Alex

On 12-jul-2005, at 4:22, John Timmer wrote:

> Man, even with colors, that conversation was hard to read.
>
> The chart Charles provided the link to looks fine, though.
>
> One thing that occurred to me this evening - right now, we have codon
> sequences, which are requisite intermediaries in the translation  
> process.
> If we're not using symbols, there's a reasonable chance that you'd  
> want to
> re-work translation anyway, but if you do have a sequence of  
> codons, they
> can't really be held by the new data-based sequence object very
> conveniently.
>
> JT
>
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