[Biococoa-dev] Initial Subversion import

Charles Parnot charles.parnot at gmail.com
Wed Mar 8 13:30:54 EST 2006


I noticed their database was failing yesterday, with database  
corrupted. We had the same issue on a different project recently. It  
turned out using the BerkeleyDB format is not a good idea for  
multiple user access, as it get corrupted all the time. Hopefully,  
they realize that too!

charles


On Mar 8, 2006, at 8:30 AM, Peter Schols wrote:

> Hi Koen,
>
> I received an email yesterday evening that they were working on the  
> SVN server (and the server still seems to be down). I'm pasting the  
> email below. Anyway, the BioCocoa SVN repos. still worked for five  
> minutes ;-)
>
> ------------
> Peter,
>
> We're going to set up a central place for people to create  
> Subversion repositories.  Please stand by while Subversion may go  
> offline.
>
> Jeff
> ------------
>
>
>
>
> On 08 Mar 2006, at 03:29, Koen van der Drift wrote:
>
>>
>> On Mar 7, 2006, at 4:06 PM, Peter Schols wrote:
>>
>>> Dear all,
>>>
>>> I've done the cleanup, reorganisation and initial SVN import of  
>>> the BioCocoa project.
>>> You can view the repository using the web interface at: http:// 
>>> bioinformatics.org/websvn/
>>>
>>> This web interface is quite interesting, it can be used to  
>>> checkout a copy of the repository. You can even use RSS to  
>>> subscribe to the repository or certain folders in it.
>>> What bothers me, is that all bioinformatics.org repositories seem  
>>> to be shared. As a result, our initial import is revision 3.  
>>> Fortunately, there is only one other SVN hosted project right  
>>> now. Nonetheless, this approach seems less than desirable and I'd  
>>> really like a separate repository for BioCocoa. I'll contact the  
>>> Bioinformatics.org sysadmin for more information on this.
>>>
>>> Update: the SVN website says the following: "You may choose any  
>>> place on the server (to which you have access) to create a  
>>> Subversion repository and import your code. However, if you want  
>>> the public to see and download your code via the Web interface,  
>>> it has to be in the main repository, svnroot."
>>> So it seems that we either have our own, private repository, or  
>>> that our repository is accesible through a web interface... I'll  
>>> check this.
>>>
>>> In the meantime, feel free to check out the repository ;-))
>>
>>
>> No luck so far :(
>>
>> I followed the instructions from this page:
>>
>> http://bioinformatics.org/docs/svn/
>>
>> but keep getting the following error:
>>
>> $ svn checkout svn+ssh://bioinformatics.org/svnroot/repository/ 
>> biococoa
>> svn: No repository found in 'svn+ssh://bioinformatics.org/svnroot/ 
>> repository/biococoa'
>>
>>
>> Did I miss anything?
>>
>> cheers,
>>
>> - Koen.
>> _______________________________________________
>> Biococoa-dev mailing list
>> Biococoa-dev at bioinformatics.org
>> https://bioinformatics.org/mailman/listinfo/biococoa-dev
>>
>
>
> Disclaimer: http://www.kuleuven.be/cwis/email_disclaimer.htm
>
> _______________________________________________
> Biococoa-dev mailing list
> Biococoa-dev at bioinformatics.org
> https://bioinformatics.org/mailman/listinfo/biococoa-dev

--
Xgrid-at-Stanford
Help science move fast forward:
http://cmgm.stanford.edu/~cparnot/xgrid-stanford

Charles Parnot
charles.parnot at gmail.com







More information about the Biococoa-dev mailing list