Actually, I looked into it a bit further and they do have code in the new c++ Cn3D to do multiple structure alignments and RSMD comparisons http://www.ncbi.nlm.nih.gov/IEB/ToolBox/CPP_DOC/lxr/ident?i=RealignStructure Cheers -=Michel=- Michel Dumontier Ph.D. candidate 1060-600 University Avenue SLRI, Mt. Sinai Hospital Dept of Biochemistry, University of Toronto Toronto, ON M5G1X5 Canada tel: 1.416.586.4800 x2416 fax 1.416.586.8869 cell: 1.416.666.4165 email: micheld at mshri.on.ca http://bioinfo.mshri.on.ca -------------- next part -------------- An HTML attachment was scrubbed... URL: http://bioinformatics.org/pipermail/biodevelopers/attachments/20030415/0313ec40/attachment.html