[Biodevelopers] BIND API

rich rich at thevillas.eclipse.co.uk
Thu Feb 24 06:38:33 EST 2005


Hi Dan,

it would be great if you could snd your parsers and schema as I  was 
hoping to throw it all into a mysql db.
The SOAP server sounds interesting as well...

cheers
Rich

Dan Bolser wrote:

>On Wed, 23 Feb 2005, rich wrote:
>
>  
>
>>Hi, i can't seem to find any bioperl modules and i'm pretty sure the 
>>seqhound api doesn't deal with the BIND database. Anyone got any neat 
>>automated way of querying the db
>>short of downloading the text files form the BIND site,
>>    
>>
>
>I have been using the text files to build a local mysql instance of the
>BIND data. I found this a very useful and convenient way to construct
>complex queries over the data.
>
>If you like I can give you my perl parsers and schema, as I worked quite
>hard to document the 'build' pipeline (although it is all manually
>executed in about 5-10 steps).
>
>Dan.
>
>  
>
>>cheers
>>Rich
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>>    
>>
>
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