[Biodevelopers] BIND API

Siddhartha Basu basu at pharm.sunysb.edu
Thu Feb 24 10:10:30 EST 2005

Hi Dan,
I am trying to do same kind of analysis but haven't made any RDBMS 
solution yet. Will highly appreciate if you share.



Dan Bolser wrote:
> On Wed, 23 Feb 2005, rich wrote:
>>Hi, i can't seem to find any bioperl modules and i'm pretty sure the 
>>seqhound api doesn't deal with the BIND database. Anyone got any neat 
>>automated way of querying the db
>>short of downloading the text files form the BIND site,
> I have been using the text files to build a local mysql instance of the
> BIND data. I found this a very useful and convenient way to construct
> complex queries over the data.
> If you like I can give you my perl parsers and schema, as I worked quite
> hard to document the 'build' pipeline (although it is all manually
> executed in about 5-10 steps).
> Dan.
>>Biodevelopers mailing list
>>Biodevelopers at bioinformatics.org
> _______________________________________________
> Biodevelopers mailing list
> Biodevelopers at bioinformatics.org
> https://bioinformatics.org/mailman/listinfo/biodevelopers

More information about the Biodevelopers mailing list