[ghemical-devel] Re: Bug#137844: ghemical: Rendering problem

[Michael Banck]

On Sat, May 04, 2002 at 04:49:06PM +0200, Jean-Luc Coulon wrote:
> I've just rebuilt 0.42 and 0.80 the same day.
> 0.42 works fine, I've the rendering problem with 0.80.

OK. This is a step forward I guess. I'll CC the ghemical-devel list,
perhaps somebody can help there?

(Please send possible answers to 137844@bugs.debian.org, too, so they
get archived in the Debian Bug Tracking System)

> I've not compiled 0.82, I've installed the binaries from Debian, and
> I've the problem with this one too.
 
> I've tried to revert the 2 statements in 0.80 :
> >        case RENDER_BALL_AND_STICK:
> >        rad = model_prefs->Double("MM1Graphics/StickSize", 0.01);
> >        res = model_prefs->Value("MM1Graphics/StickResolution", 6);
> >        break;
> >
> >        case RENDER_CYLINDERS:
> >        rad = model_prefs->Double("MM1Graphics/CylinderSize", 0.035);
> >        res = model_prefs->Value("MM1Graphics/CylinderResolution", 12);
> >        break;
> 
> to the ones in 0.42
> >        case RENDER_BALL_AND_STICK:
> >        rad = 0.01; res = 6;
> >
> >        case RENDER_CYLINDERS:
> >        rad = 0.035; res = 12;
> >        break;
> 
> I can see 'something' on the screen but all is very thin. So I think
> MM1Graphics/StickSize and others should have to be set before....
> 
> >In the new system, the values are user-configurable, and the user's
> >preferences are read from a configuration file under $HOME/.gnome/
> 
> I think it is in $HOME/.gnome/accels/ghemical, but _which_ values are
> configurable ?
> I cannot see anything related to the rendering in the configuration
> file. You will find attached a copy of my $HOME/.gnome/accels/ghemical,
> maybe it is wrong but I've no idea what it should be and there is no
> 'parameters' entry in ghemical to set it up.
> 
> Any other idea to go further ?
> 
> -------
> Regards
> 	Jean-Luc
> ; ghemical GtkItemFactory rc-file         -*- scheme -*-
> ; this file is an automated menu-path dump
> ;
> ;(menu-path "<ghemical>/-Orphan/Fichier/Ouvrir..." "F3")
> ;(menu-path "<ghemical>/-Orphan/Select/Selection Mode" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Label BondType" "")
> ;(menu-path "<ghemical>/Fichier/New Project.../mm2gp - reduced protein model" "")
> ;(menu-path "<ghemical>/-Orphan/Settings.../Set Current Bondtype..." "")
> ;(menu-path "<ghemical>/-Orphan/Fichier" "")
> ;(menu-path "<ghemical>/Aide" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Lights" "")
> ;(menu-path "<ghemical>/-Orphan/Objects/Ribbon" "")
> ;(menu-path "<ghemical>/Fichier" "")
> ;(menu-path "<ghemical>/-Orphan/Select/Select None" "")
> ;(menu-path "<ghemical>/-Orphan/Fichier/Import..." "")
> ;(menu-path "<ghemical>/Fichier/Open Project.../mm1gp - molecular mechanics" "")
> ;(menu-path "<ghemical>/-Orphan/Build/Hydrogens/Supprimer" "")
> ;(menu-path "<ghemical>/-Orphan/Select/Selection Mode/Select Chains" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Ball & Stick" "")
> ;(menu-path "<ghemical>/-Orphan/Compute/Random Conformational Search..." "")
> ;(menu-path "<ghemical>/-Orphan/Render/Views/Create/New Camera" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Views/Create" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Label Index" "")
> ;(menu-path "<ghemical>/-Orphan/Build/Hydrogens" "")
> ;(menu-path "<ghemical>/-Orphan/Build/Center" "")
> ;(menu-path "<ghemical>/-Orphan/Fichier/Fermer" "<Control>w")
> ;(menu-path "<ghemical>/-Orphan/Settings.../Set Current Element..." "")
> ;(menu-path "<ghemical>/-Orphan/Render/Views/Delete This View" "")
> ;(menu-path "<ghemical>/-Orphan/Objects" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Views/Attach/Detach This View" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Quick Update Mode" "")
> ;(menu-path "<ghemical>/-Orphan/Compute/Setup..." "")
> ;(menu-path "<ghemical>/Fenêtres/MDI Mode.../Notebook" "")
> ;(menu-path "<ghemical>/Fichier/New Project.../qm1gp - quantum mechanics" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/van der Waals" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Label Element" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Projection/Red-Green Stereo" "")
> ;(menu-path "<ghemical>/-Orphan/Compute/Energy" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Label Nothing" "")
> ;(menu-path "<ghemical>/-Orphan/Build/Zap All" "")
> ;(menu-path "<ghemical>/-Orphan/Objects/volume-rendered ESP" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Views" "")
> ;(menu-path "<ghemical>/-Orphan/Build/Library" "")
> ;(menu-path "<ghemical>/Fenêtres/MDI Mode..." "")
> ;(menu-path "<ghemical>/Fichier/New Project..." "")
> ;(menu-path "<ghemical>/Fichier/Open Project.../mm2gp - reduced protein model" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Label Charge" "")
> ;(menu-path "<ghemical>/-Orphan/Compute/Molecular Dynamics..." "")
> ;(menu-path "<ghemical>/-Orphan/Render/Projection" "")
> ;(menu-path "<ghemical>/Fichier/New Project.../mm1gp - molecular mechanics" "")
> ;(menu-path "<ghemical>/-Orphan/Settings..." "")
> ;(menu-path "<ghemical>/-Orphan/Build" "")
> ;(menu-path "<ghemical>/Fichier/Open Project..." "")
> ;(menu-path "<ghemical>/Aide/À propos..." "")
> ;(menu-path "<ghemical>/-Orphan/Render/Lights/Display Local Lights" "")
> ;(menu-path "<ghemical>/-Orphan/Select/Selection Mode/Select Molecules" "")
> ;(menu-path "<ghemical>/-Orphan/Compute/Formula" "")
> ;(menu-path "<ghemical>/-Orphan/Select/Invert Selection" "")
> ;(menu-path "<ghemical>/-Orphan/MD Trajectory Viewer..." "")
> ;(menu-path "<ghemical>/Fichier/Open Project.../qm1gp - quantum mechanics" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Wireframe" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Projection/Perspective" "")
> ;(menu-path "<ghemical>/-Orphan/Objects/ESP-plane" "")
> ;(menu-path "<ghemical>/-Orphan/Objects/Delete Current Object" "")
> ;(menu-path "<ghemical>/-Orphan/Fichier/Export..." "")
> ;(menu-path "<ghemical>/Fichier/Quitter" "<Control>q")
> ;(menu-path "<ghemical>/-Orphan/Select/Selection Mode/Select Atoms" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Views/Create/New View" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Lights/Create New Light" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Label AtomType" "")
> ;(menu-path "<ghemical>/-Orphan/Select" "")
> ;(menu-path "<ghemical>/Fenêtres" "")
> ;(menu-path "<ghemical>/-Orphan/Select/Selection Mode/Select Residues" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Projection/Relaxed-Eye Stereo" "")
> ;(menu-path "<ghemical>/Aide/Aide" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Lights/Display Global Lights" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Cylinders" "")
> ;(menu-path "<ghemical>/-Orphan/Compute" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Nothing" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Color Elements" "")
> ;(menu-path "<ghemical>/-Orphan/Build/Hydrogens/Ajouter" "")
> ;(menu-path "<ghemical>/-Orphan/Build/Sequence Builder..." "")
> ;(menu-path "<ghemical>/-Orphan/Convert to QM project" "")
> ;(menu-path "<ghemical>/-Orphan/Render/Rendering Mode/Color State" "")
> ;(menu-path "<ghemical>/Fenêtres/MDI Mode.../Toplevel" "")
> ;(menu-path "<ghemical>/-Orphan/Render" "")
> ;(menu-path "<ghemical>/-Orphan/Compute/Geometry Optimization..." "")
> ;(menu-path "<ghemical>/-Orphan/Compute/Plot Energy vs. 2 Torsion Angles..." "")
> ;(menu-path "<ghemical>/-Orphan/Render/Projection/Orthographic" "")
> ;(menu-path "<ghemical>/-Orphan/Objects/ESP-surface" "")
> ;(menu-path "<ghemical>/-Orphan/Compute/Plot Energy vs. 1 Torsion Angle..." "")
> ;(menu-path "<ghemical>/-Orphan/Fichier/Enregistrer sous..." "")
> ;(menu-path "<ghemical>/-Orphan/Select/Select All" "")
> ;(menu-path "<ghemical>/Fenêtres/MDI Mode.../Modal" "")
> ;(menu-path "<ghemical>/-Orphan/Objects/ESP-colored vdW-surface" "")