I recently ran across an article on the new "RM1" semiempirical model. Basically, a group from Brazil found a better parameterization for AM1 -- same model, same number of parameters. Just the parameters changed. The result is generally better, except slightly worse on bond and dihedral angles than AM1. But heat of formation, dipole moment, ionization potential (i.e., HOMO energy) and bond lengths are all better. RMI: A reparameterization of AM1 for H, C, N, O, P, S, F, Cl, Br, and I by Rocha GB, Freire RO, Simas AM, et al. http://dx.doi.org/10.1002/jcc.20425 Conveniently, the supplemental information includes a file formatted for MOPAC "EXTERNAL" keyword, e.g. AM1 GNORM=0.01 SCFCRT=1.D-8 EXTERNAL=RM1.rm1 (WARNING) > Whenever you use AM1 EXTERNAL=RM1.rm1, please make sure that your > molecule does not contain any atoms other than H, C, N, O, P, S, F, > Cl, Br, and I; otherwise there will be a mix of RM1 with AM1 > parameters, which will render the calculation meaningless. I'm attaching the RM1.rm1 file -- if anyone would like to try it out with MOPAC7, it might be interesting. Perhaps a new version of Ghemical can add "RM1" to the list of calculation options and use the external parameter file. Cheers, -Geoff -------------- next part -------------- A non-text attachment was scrubbed... Name: RM1.rm1 Type: application/octet-stream Size: 15101 bytes Desc: not available Url : http://bioinformatics.org/pipermail/ghemical-devel/attachments/20060811/58d1e0ac/RM1-0001.obj -------------- next part --------------