[Molvis-list] Structural alignment of alpha carbons?

timothy driscoll molvisions at mac.com
Tue Jan 4 16:41:09 EST 2005

On 2005-01-04 (16:17) Eric Martz wrote:

>Can someone please tell me how to align a selected subset of atoms
>in two PDB file models that contain only alpha carbon atoms?
>Normally I do structural alignments in DeepView, but it seems to
>reject alpha-carbon-only models. Is there free software for Windows
>(or a server) that can align alpha-carbon only models? Or will
>someone kindly volunteer to do a single alignment for me?

hi Eric,

will this work?


I don't see any restrictions against alpha-carbon only chains.


Timothy Driscoll
molvisions - see, grasp, learn.
usa:north carolina:wake forest

"There's too much blood in my caffeine system."

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