2/10/05 Nadine asked "I would appreciate it if someone could tell me how to draw a line between two given atoms, using Pymol. If this is not possible with Pymol, what software could do it?" Sinasi Ellialtioglu asked "I am a Rasmol user, and since this list is now bringing together a multi-software society I would like to ask if drawing polygons around oxygen octahedra or tetrahedra in various crystal structures (like in YBCO) is possible in any of Rasmol, Jmol, Chime, Protein Explorer, or else." >>>>>>>>I have not used pymol. But one can make lines connecting any two atoms by modifying CONECT records in the PDB files and view it in Rasmol. If you send the corresponding pdb file to me I can ask my students to modify the file for the desired result. Cheers! Abhijit Dr. Abhijit Mitra Associate Professor Coordinator Bioinformatics Program and Bioinformatics Research Centre International Instutute of Information Technology (Deemed University) Gachibowli, Hyderabad 500 019, INDIA Phone: +91 40 2300 1967 ext 171 Fax: +91 40 2300 1413 Home: +91 40 2300 6281 URL: http://www.iiit.net http://bioinformatics.iiit.net Email: abi_chem at iiit.net -- No virus found in this outgoing message. Checked by AVG Anti-Virus. Version: 7.0.300 / Virus Database: 265.8.7 - Release Date: 2/10/2005