[Proteopedia] Proteopedia PubMed/DOI references

[Eric Martz]

Dear Jaim,

First, these enhancements are excellent!

It appears to me that the DOI generates a full citation only when the 
publication is in PubMed, which of course does not index everything.

An example is Bob Hanson's recent paper in J. Appl. Crystallography. 
I cannot find it in PubMed. I'm not sure whether it is simply too 
new, or whether it will not be indexed there.

Ref #7 at http://proteopedia.org/wiki/index.php/Jmol
demonstrates what happens.

In Ref #6, I have manually inserted the http://dx.doi.org. Perhaps 
this could be done automatically when the ref is not in PubMed?

How do you recommend that we handle such cases?

Also, the use of DOI as an alternative to PMID could be mentioned at
http://proteopedia.org/wiki/index.php/Help:Editing#Citing_Literature_References

Is the DOI syntax documented somewhere else in Protepedia?

Thanks, -Eric
.
At 8/26/10, jaime.prilusky at weizmann.ac.il wrote:
>Dear Proteopedians,
>
>We've enhanced the paper referencing extension on Proteopedia to
>allow it to accept either PubMed or doi (Digital Object Identifier)
>values.
>
>These should return the same reference:
>
><ref> PMID:20711621</ref>
><ref>pmid 20711621</ref>
><ref>doi:10.1007/s00775-010-0694-2</ref>
><ref> DOI 10.1007/s00775-010-0694-2 </ref>
>
>Please report any problems you find.
>
>Jaim
>--
>  Dr Jaime Prilusky                      | Jaime.Prilusky at weizmann.ac.il
>  Head Bioinformatics                    |
>  R&D Bioinformatics and Data Management |
>  Department of Biological Services      |
>  Weizmann Institute of Science          | fax: 972-8-9344113
>  76100 Rehovot - Israel                 | tel: 972-8-9344959
>
>  OCA, http://oca.weizmann.ac.il (the protein structure/function database)
>  Proteopedia, http://proteopedia.org (because life has more than 2D)
>  ------------------------------------------------------------------------
>
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