Allen S. Rout
asr at ufl.edu
Tue May 4 02:00:33 EDT 2010
>> On Tue, 04 May 2010 07:55:08 +0200, Pierre-Yves <pingou at pingoured.fr> said:
> Smock seems to be a nice solution but I do not know how it will perform
> for circular dependencies which we will have a lot with bioconductor.
> Just out of curiosity, did you manage to fix the R script ?
> Anyway thanks for this script, it helps us to get started.
I'm not certain I understand the problem you are having with it.
This evening, I started out messing with it: I set a specific CRAN
repo (rather than having each of us select one by hand). I also
updated it to go with R 2.11, which required some changes to
I didn't find anything I saw as a false positive this evening:
> source ("./calc_buildorders.R")
Warning: dependencies âpkpkgâ, âgetmfclstuffâ are not available
Warning: dependency ârcomâ is not available
Warning: dependency âRevobaseâ is not available
Warning: dependency âqtpaintâ is not available
Iteration 1; 2083 packages remain.
Iteration 2; 1317 packages remain.
Iteration 3; 817 packages remain.
Iteration 4; 380 packages remain.
Iteration 5; 107 packages remain.
Iteration 6; 38 packages remain.
Iteration 7; 9 packages remain.
Iteration 8; 0 packages remain.
I'm wondering if what you were seeing was related to drift in CRAN?
- Allen S. Rout
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