[ssml] FW: Consesus of Multiple sequence alignment

Goel, Manisha MAG at Stowers-Institute.org
Tue Aug 24 16:07:09 EDT 2004



>  -----Original Message-----
> From: 	Goel, Manisha  
> Sent:	Tuesday, August 24, 2004 2:15 PM
> To:	'pdb-l at sdsc.edu'
> Subject:	Consesus of Multiple sequence alignment
> 
> Hi all,
> 
> I am new to seq alignments and I am at present using a couple of
> programs to align my sequences (ClustalX, MUSCLE, T_Cofee)
> The alignment agrees in most parts but still differs substantially, Is
> there any automated method of combining the Multiple seq alignment
> from various sources to get a consensus alignment. Otherwise, I guess,
> I have to compare all of the outputs to generate one.
> 
> Thanks,
> - Manisha 
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