Alignment

set_characters_per_line 60
set_color_mode charge
set_conservation_threshold 0
add_xref UNIPROT:P02062 , HORSE

add_xref UNIPROT:P02075 , SHEEP

add_xref UNIPROT:P02057 , RABIT

add_xref UNIPROT:P02118 , ANSIN

add_xref UNIPROT:P68223 , MACFA

add_xref UNIPROT:P80044 , PAGBE

add_xref UNIPROT:P68871 , PANTR

add_xref UNIPROT:P02067 , PIG

add_xref UNIPROT:P02088 , MOUSE


#----------


find_uniprot_id *
GFF_expasy_features *
# Deleted commands:  [aa_sequence ]

#end_of_script_1378667402872_


HORSE	VQLSGEEKAAVLALWDKVNEEEVGGEALGRLLVVYPWTQRFFDSFGDLSNPGAVMGNPKV - ----------- --------------- ---------- ------ ---
SHEEP	MLTAEEKAAVTGFWGKVKVDEVGAEALGRLLVVYPWTQRFFEHFGDLSNADAVMNNPKVK ----------- --------------- ------ --- ------- ---- -
RABIT	MVHLSSEEKSAVTALWGKVNVEEVGGEALGRLLVVYPWTQRFFESFGDLSSANAVMNNPK -- ----------- --------------- ---------- ------ -- - -
ANSIN	VHWSAEEKQLITGLWGKVNVADCGAEALARLLIVYPWTQRFFSSFGNLSSPTAILGNPMV ----------- --------------- ---------- ----- ---
MACFA	MVHLTPEEKNAVTTLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSSPDAVMGNPK --
PAGBE	MVEWTDKERSIISDIFSHMDYDDIGPKALSRCLIVYPWTQRHFSGFGNLYNAEAIIGNAN - ------------- --------------- ------ --- ----- --
PANTR	MVHLTPEEKSAVTALWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSTPDAVMGNPK --- ------------------------------------------------------- -- ------- ---- ---------------------- --- -- --- -- - - - ---- - - - -
PIG	MVHLSAEEKEAVLGLWGKVNVDEVGGEALGRLLVVYPWTQRFFESFGDLSNADAVMGNPK -- ----------- --------------- ---------- ---- --
MOUSE	MVHLTDAEKAAVSCLWGKVNSDEVGGEALGRLLVVYPWTQRYFDSFGDLSSASAIMGNAK - ------------- --------------- ------ - ----- -- - -

	KAHGKKVLHSFGEGVHHLDNLKGTFAALSELHCDKLHVDPENFRLLGNVLVVVLARHFGK ---------------------------------- -------------------- - -
	AHGKKVLDSFSNGMKHLDDLKGTFAQLSELHCDKLHVDPENFRLLGNVLVVVLARHHGNE --------------- -------------- --------------------- - - -
	VKAHGKKVLAAFSEGLSHLDNLKGTFAKLSELHCDKLHVDPENFRLLGNVLVIVLSHHFG ----------------- ------- --------- ------------------- - - -
	RAHGKKVLTSFGDAVKNLDNIKNTFAQLSELHCDKLHVDPENFRLLGDILIIVLAAHFAK ------------------- -------------- -------------------- - -
	VKAHGKKVLGAFSDGLNHLDNLKGTFAQLSELHCDKLHVDPENFKLLGNVLVCVLAHHFG - -
	VAAHGIKVLHGLDRGVKNMDNIAATYADLSTLHSEKLHVDPDNFKLLSDCITIVLAAKMG ---------- -------- ---- --------- ------------------- - -
	VKAHGKKVLGAFSDGLAHLDNLKGTFATLSELHCDKLHVDPENFRLLGNVLVCVLAHHFG ------------------------------------------------------------ ---- ------- -- --- ---- ---------- ---- ------ ---- - - - --
	VKAHGKKVLQSFSDGLKHLDNLKGTFAKLSELHCDQLHVDPENFRLLGNVIVVVLARRLG --------------- ----------------- ------------------- - -
	VKAHGKKVITAFNDGLNHLDSLKGTFASLSELHCDKLHVDPENFRLLGNMIVIVLGHHLG ----------------- ----------------- ------------------- - - -

	DFTPELQASYQKVVAGVANALAHKYH - ------------------ ---
	FTPVLQADFQKVVAGVANALAHKYH ---------------------- - -
	KEFTPQVQAAYQKVVAGVANALAHKYH -- ----------------------
	EFTPDCQAAWQKLVRVVAHALARKYH - ------------------ ---
	KEFTPQVQAAYQKVVAGVANALAHKYH
	HAFTAETQGAFQKFLAVVVSALGKQYH -- --------------------
	KEFTPPVQAAYQKVVAGVANALAHKYH -- ------------------------ -- - ----------- -------- - --
	HDFNPNVQAAFQKVVAGVANALAHKYH -- ---------------------
	KDFTPAAQAAFQKVVAGVATALAHKYH -- ------------------- - -

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Exported by Protein workbench alignment-to-html

	T	Turn
	S	Site
	S	S-nitrosocysteine
	NV	Natural_variant
	BS	Binding_site
	H	Helix
	P	Peptide
	N	N-acetylvaline
	NIHA	N-pyruvate_2-iminyl-valine%3b_in_hb_a1b
	PS	Phosphoserine
	NIVR	N-acetylalanine%3b_in_variant_raleigh
	IM	Initiator_methionine
	MB	Metal_binding