Interactive example of overlapping residue annotations. The first sequence has two residue selections indicated by cyan and red
background. The second sequence exhibits two residue selections which are shown as red and green underlining. The text information pops up
when the mouse is moved.
Create alignment documents with the
Web interface
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Left snapshot: By clicking amino acids in the alignment, the respective position in 3D is indicated. Right snapshot: vice versa. In both cases, the rendering style of the picked amino acid or atom can be changed or a text label attached.
Why without Java? Java constitutes an additional layer of software and thereby carries an own set of technical problems and risks. A not in-frequent problem is that Java applets simply fail to run. Since January 2014, the message Application Blocked By Security Settings or Your security settings have blocked a local application from running is often exhibited with alignment applets like Jalview. In addition Java bears risks of (I) security threats, (II) browser crashes and (III) memory eating. This was our motivation to develope alignment visualization platform without plugins or Java. |