Changelog

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Contents

Version 0.7

Version 0.7.0 (current release)

header: AA<tab>Colour
each line after: characters<tab>#RGB
example: RHKSY<tab>#A077EF

Version 0.6

Version 0.6.2

Version 0.6.1

http://www.exampledepot.com/egs/java.awt.datatransfer/ToClip.html

Version 0.6.0

Version 0.5

Version 0.5.8

Version 0.5.7

default to DNA
U only found in RNA
F,E,J,L,O,Q,X,Z,* only found in protein

Version 0.5.6

Version 0.5.5

Version 0.5.4

Version 0.5.3

Version 0.5.2

Version 0.5.1

Version 0.5.0

   (below is a list of what fields are used for each type)
DNA/RNA: Direction, Topoplogy, Strandedness, Colour Mask
Protein: Colour Mask
Text: Colour Mask

version 0.4

Version 0.4.4

Version 0.4.3

Version 0.4.2

Version 0.4.1

DNA/RNA
A = red
B,D,H,N,M,R,S,V,W,Y = yellow
C = blue
G = black
U,T = lime green
X = yellow 'N'
all others = grey '-'
PROTEIN
A,G,P,S,T = fuchsia
B,D,E,N,Q,Z = black
C = red
F,W,Y = blue
H,K,R = turquoise
I,L,M,V = lime green
X,* = yellow
all others = grey

Version 0.4.0

high priority

Alignment gaps (-)
Unambiguous characters
DNA/RNA (A,C,G,T,U)
Protein (all non-ambiguous)
Ambiguous characters
DNA/RNA (all other characters)
Protein (B,Z,*,X)

pre 0.4

Version 0.3.3

Test things side-by-side in GDE and BioLegato

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