From Bioinformatics.Org Wiki
Duplication generally refers to duplication events that lead to homologous sequences.
- GEANFAMMER - "GEnome ANalysis and Protein FAMily MakER"
- GenomePixelizer - detection of duplicating events in genomes, displaying the genetic maps, comparative genetics in general
- PhyloGrapher - a program designed to visualize and study evolutionary relationships between families of homologous genes or proteins