MUMmer

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BioLinux
Homepage http://mummer.sourceforge.net/
Source code http://sourceforge.net/projects/mummer/
Version 3.22
Contact email or mailing list mummer-users@lists.sourceforge.net
Tags Alignment, Genome scale
License Artistic License
Packaging status Unknown
Operating system Linux
Architecture

MUMmer is a modular system for the rapid whole genome alignment of finished or draft sequence. Released as a package providing an efficient suffix tree library, seed-and-extend alignment, SNP detection, repeat detection, and visualization tools. Version 3.0 was developed by Stefan Kurtz, Adam Phillippy, Arthur L Delcher, Michael Smoot, Martin Shumway, Corina Antonescu and Steven L Salzberg - most of whom are at The Institute for Genomic Research in Maryland, USA. POSIX OS required.

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