Phyloscan

From Bioinformatics.Org Wiki

Contents 1 Description 2 Home page 3 Source code 4 Executables 5 Supported platforms 6 Documentation 7 Contact information 8 See also

Description

Phyloscan is a free web server that scans mixed aligned and unaligned DNA sequence data for statistically significant instances of a user-supplied pattern / motif.

Home page

http://bayesweb.wadsworth.org/cgi-bin/phyloscanV2.pl

Source code

Not currently available.

Executables

Not currently available.

Supported platforms

Web service.

Documentation

The web service provides a help page.

Further information is available from the original publication (open access):

C. Steven Carmack, Lee Ann McCue, Lee A. Newberg, and Charles E. Lawrence (2007) PhyloScan: Identification of transcription factor binding sites using cross-species evidence. Algorithms for Molecular Biology, 2(1), article 1. PubMed: 17244358, doi: 10.1186/1748-7188-2-1.

Contact information

Please submit queries via the web service contact page.

See also