BNA: Biological Network Analysis : Design Notes

Here are some of the features and notes about PmWiki's design decisions. Many of these derive directly from the PmWikiPhilosophy and lots of discussion on the mailing lists.

PmWiki:FlatFileAdvantages - why PmWiki uses flat files to store pages instead of an SQL database
PmWiki:HierarchicalGroups - why PmWiki doesn't support nested groups
PmWiki:PageLocking - how PmWiki works without locking pages (see also simultaneous edits)
PmWiki:SearchImprovements - why PmWiki has a native search engine
PmWiki:FilePermissions - some information about PmWiki's file permission settings

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