In this project I try to produce a programme which calculates hydrophobicity plots of proteins.
The programme is written in Java and provides an easy GUI.
Features so far:
- calculates plot with parameters by Kyte & Doolittle and displays it.
- paste sequence from clipboard
- to be continued
Planned Features:
- support of several sets of parameters (Kyte & Doolittle, ..)
- export of graphics in common formats
- easy handling
- documentation
- to be continued
Link to CVS-Repository: CVS
Note: One file has been uploaded. This version of the programme provides only basic functionality. There will be great changes concerning layout and functionality soon.
Reference
Kyte, J. and Doolittle, R. 1982. A simple method for displaying the hydropathic character of a protein. J. Mol. Biol. 157: 105-132.