[BiO BB] Aligning sequence from pdb to an established MSA

[Dan Bolser]

HMM like HMMER can do this.

On 30/08/2007, Kai Ye <k.ye at lacdr.leidenuniv.nl> wrote:
>
> Dear all:
>
> Any idea about a linux program to align the sequence extracted from pdb
> with
> an established MSA. In the MSA there may or may not be a sequence
> identical
> to the one from pdb.
>
> Thanks in advance!
>
> Kai
>
>
>
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