[Biococoa-dev] bug alert

Koen van der Drift kvddrift at earthlink.net
Sat Dec 4 18:38:11 EST 2004


Alex,

Please go ahead and submit these changes.

- Koen.


On Dec 4, 2004, at 5:34 PM, Alexander Griekspoor wrote:

> Ha Koen,
>
> First of all the newly added BCSequenceFactory.h file was still set to 
> project instead of private in a fresh checkout from the CVS.
> Next, I got a compile error that the BCFoundationDefines.h could not 
> be found. The by now famous, quit XCode, delete the build directory, 
> and reopen the project, helped however...
> After that everything seems to build and runs without problems Koen..
>
> Something else, in general the idea would be to add the BCTools prefix 
> to all tools, for instance:
> // BCTools
> #import <BioCocoa/BCToolMassCalculator.h>
> #import <BioCocoa/BCToolTranslatorDNA.h>
>
> I would like to propose to do the same for the following new ones:
> #import <BioCocoa/BCFindSequence.h>    ->  BCToolFindSequence (or even 
> BCToolSequenceFinder)
> #import <BioCocoa/BCSymbolCounter.h>   ->  BCToolSymbolCounter
> #import <BioCocoa/BCComplement.h>	   ->  BCToolComplement
> #import <BioCocoa/BCSequenceFactory.h> ->  BCToolSequenceFactory
>
> Similarly, lets stick to the guidelines and add the "shared" prefix to 
> all class methods that generate static objects, thus
> + sequenceFactory; -> + sharedSequenceFactory.
>
> Cheers,
> Alex
>
>
> Op 4-dec-04 om 16:45 heeft Koen van der Drift het volgende geschreven:
>
>> Grrr - another crash creeped in :(
>>
>> I will look into it tonight, but feel free to do so as well.
>>
>>
>> - Koen.
>>
>>
>> _______________________________________________
>> Biococoa-dev mailing list
>> Biococoa-dev at bioinformatics.org
>> https://bioinformatics.org/mailman/listinfo/biococoa-dev
>>
>>
> **************************************************************
>                         ** Alexander Griekspoor **
> **************************************************************
>                  The Netherlands Cancer Institute
>                  Department of Tumorbiology (H4)
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>                       E-mail: a.griekspoor at nki.nl
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