[Biococoa-dev] Update

Koen van der Drift kvddrift at earthlink.net
Sat Feb 26 08:09:41 EST 2005


On Feb 26, 2005, at 7:27 AM, Koen van der Drift wrote:

> Thanks for committing the code, John. A few initial comments:
>
> - BCNucleotide should call it's super method in 
> initializeComplementRelationships, otherwise the 'represents' etc 
> never gets set up.
> - should BCNucleotide have a copyWithZone method?
> - in the Complement tool, maybe you should check if the sequence is 
> DNA or RNA, instead of protein? Later on we might have other sequence 
> types (carbohydrates, for instance).
>
>

Oh, one more thing, I guess the complement lines in the headers of 
BCSequenceRNA and BCSequenceDNA can be removed, because it is already 
in their super?

cheers,

- Koen.




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