Basic Information | |||
Gene ID | 100165883 | ||
Gene Name | LOC100165883 | ||
Full Name | PREDICTED: LIM homeobox transcription factor 1-beta-like[Acyrthosiphon pisum]. | ||
Organism | Acyrthosiphon pisum [7029] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_001946328 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 169 | 232 | 8.70e-21 | Homeodomain-like |
XP_001946328 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 36 | 92 | 3.40e-12 | Zinc finger, LIM-type |
XP_001946328 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 97 | 155 | 3.60e-13 | Zinc finger, LIM-type |
XP_001946328 | Pfam | PF00046 | IPR001356 | 181 | 237 | 1.10e-16 | Homeobox domain |
XP_001946328 | Pfam | PF00412 | IPR001781 | 39 | 92 | 1.10e-10 | Zinc finger, LIM-type |
XP_001946328 | Pfam | PF00412 | IPR001781 | 98 | 155 | 2.30e-12 | Zinc finger, LIM-type |
XP_001946328 | ProSitePatterns | PS00027 | IPR017970 | 213 | 236 | - | Homeobox, conserved site |
XP_001946328 | ProSitePatterns | PS00478 | IPR001781 | 39 | 73 | - | Zinc finger, LIM-type |
XP_001946328 | ProSitePatterns | PS00478 | IPR001781 | 98 | 133 | - | Zinc finger, LIM-type |
XP_001946328 | ProSiteProfiles | PS50023 | IPR001781 | 37 | 95 | 0.00e-00 | Zinc finger, LIM-type |
XP_001946328 | ProSiteProfiles | PS50023 | IPR001781 | 96 | 158 | 0.00e-00 | Zinc finger, LIM-type |
XP_001946328 | ProSiteProfiles | PS50071 | IPR001356 | 178 | 238 | 0.00e-00 | Homeobox domain |
XP_001946328 | SMART | SM00132 | IPR001781 | 38 | 89 | 5.30e-13 | Zinc finger, LIM-type |
XP_001946328 | SMART | SM00132 | IPR001781 | 97 | 151 | 6.20e-16 | Zinc finger, LIM-type |
XP_001946328 | SMART | SM00389 | IPR001356 | 180 | 242 | 4.10e-21 | Homeobox domain |
XP_001946328 | SUPERFAMILY | SSF46689 | IPR009057 | 169 | 240 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_001946328 | PF00412 | 2.7e-23 | LIM | LIM domain |
XP_001946328 | PF00046 | 6.2e-17 | Homeobox | Homeobox domain |
XP_001946328 | PF05920 | 0.0004 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_001946328 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_001946328 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
XP_001946328 | GO:0007275 | biological_process | multicellular organismal development |
XP_001946328 | GO:0005634 | cellular_component | nucleus |
XP_001946328 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_001946328 | GO:0008270 | molecular_function | zinc ion binding |
XP_001946328 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7227 | Drosophila melanogaster | 39405 | 7070 | Tribolium castaneum | 655506 |