Basic Information | |||
Gene ID | 100366515 | ||
Gene Name | LOC100366515 | ||
Full Name | PREDICTED: lim 1/5-like [Saccoglossus kowalevskii]. | ||
Organism | Saccoglossus kowalevskii [10224] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_002736028 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 270 | 327 | 2.00e-23 | Homeodomain-like |
XP_002736028 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 3 | 66 | 9.70e-17 | Zinc finger, LIM-type |
XP_002736028 | Gene3D | G3DSA:2.10.110.10 | IPR001781 | 67 | 120 | 2.80e-14 | Zinc finger, LIM-type |
XP_002736028 | Pfam | PF00046 | IPR001356 | 268 | 324 | 1.50e-19 | Homeobox domain |
XP_002736028 | Pfam | PF00412 | IPR001781 | 5 | 59 | 1.70e-15 | Zinc finger, LIM-type |
XP_002736028 | Pfam | PF00412 | IPR001781 | 64 | 120 | 5.20e-17 | Zinc finger, LIM-type |
XP_002736028 | ProSitePatterns | PS00027 | IPR017970 | 300 | 323 | - | Homeobox, conserved site |
XP_002736028 | ProSitePatterns | PS00478 | IPR001781 | 5 | 39 | - | Zinc finger, LIM-type |
XP_002736028 | ProSitePatterns | PS00478 | IPR001781 | 64 | 99 | - | Zinc finger, LIM-type |
XP_002736028 | ProSiteProfiles | PS50023 | IPR001781 | 3 | 62 | 0.00e-00 | Zinc finger, LIM-type |
XP_002736028 | ProSiteProfiles | PS50023 | IPR001781 | 63 | 125 | 0.00e-00 | Zinc finger, LIM-type |
XP_002736028 | ProSiteProfiles | PS50071 | IPR001356 | 265 | 325 | 0.00e-00 | Homeobox domain |
XP_002736028 | SMART | SM00132 | IPR001781 | 4 | 55 | 1.90e-20 | Zinc finger, LIM-type |
XP_002736028 | SMART | SM00132 | IPR001781 | 63 | 118 | 2.20e-20 | Zinc finger, LIM-type |
XP_002736028 | SMART | SM00389 | IPR001356 | 267 | 329 | 5.40e-25 | Homeobox domain |
XP_002736028 | SUPERFAMILY | SSF46689 | IPR009057 | 263 | 329 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_002736028 | PF00412 | 6.3e-33 | LIM | LIM domain |
XP_002736028 | PF00046 | 7.2e-20 | Homeobox | Homeobox domain |
XP_002736028 | PF05920 | 2.2e-05 | Homeobox_KN | Homeobox KN domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_002736028 | GO:0006351 | biological_process | transcription, DNA-templated |
XP_002736028 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
XP_002736028 | GO:0005634 | cellular_component | nucleus |
XP_002736028 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_002736028 | GO:0008270 | molecular_function | zinc ion binding |
XP_002736028 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
7425 | Nasonia vitripennis | 100116733 | 7029 | Acyrthosiphon pisum | 100158984 |
400682 | Amphimedon queenslandica | 100633432 | 30195 | Bombus terrestris | 100644955 |
7227 | Drosophila melanogaster | 31813 | 7668 | Strongylocentrotus purpuratus | 373522 |
7757 | Petromyzon marinus | ENSPMAG00000008904 | 37347 | Tupaia belangeri | ENSTBEG00000003770 |
51511 | Ciona savignyi | ENSCSAVG00000004922 |