Basic Information
Gene ID 100634225
Gene Name LOC100634225
Full Name PREDICTED: replication factor C subunit 1-like [Amphimedonqueenslandica].
Organism Amphimedon queenslandica [400682]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_003384833 Gene3D G3DSA:3.40.50.10190 IPR001357 311 390 4.80e-22 BRCT domain
XP_003384833 Pfam PF00004 IPR003959 538 660 2.00e-13 ATPase, AAA-type, core
XP_003384833 Pfam PF00533 IPR001357 313 388 6.30e-14 BRCT domain
XP_003384833 Pfam PF08519 IPR013725 798 862 1.40e-19 DNA replication factor RFC1, C-terminal
XP_003384833 Pfam PF08519 IPR013725 864 917 1.90e-10 DNA replication factor RFC1, C-terminal
XP_003384833 PIRSF PIRSF036578 IPR012178 1 994 6.00e-211 DNA replication factor C, large subunit
XP_003384833 ProSiteProfiles PS50172 IPR001357 311 391 0.00e-00 BRCT domain
XP_003384833 SMART SM00292 IPR001357 313 391 3.20e-15 BRCT domain
XP_003384833 SMART SM00382 IPR003593 533 664 6.40e-11 AAA+ ATPase domain
XP_003384833 SUPERFAMILY SSF48019 IPR008921 731 861 0.00e-00 DNA polymerase III, clamp loader complex, gamma/delta/delta subunit, C-terminal
XP_003384833 SUPERFAMILY SSF52113 IPR001357 312 390 0.00e-00 BRCT domain
XP_003384833 SUPERFAMILY SSF52540 IPR027417 481 718 0.00e-00 P-loop containing nucleoside triphosphate hydrolase

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_003384833 PF08519 9.8e-33 RFC1 Replication factor RFC1 C terminal domain
XP_003384833 PF00533 2.1e-14 BRCT BRCA1 C Terminus (BRCT) domain
XP_003384833 PF00004 8.6e-14 AAA ATPase family associated with various cellular activities (AAA)
XP_003384833 PF00910 4.8e-05 RNA_helicase RNA helicase
XP_003384833 PF13401 0.00015 AAA_22 AAA domain
XP_003384833 PF12738 0.00021 PTCB-BRCT twin BRCT domain
XP_003384833 PF05496 0.00055 RuvB_N Holliday junction DNA helicase ruvB N-terminus
XP_003384833 PF13207 0.00075 AAA_17 AAA domain

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100119045 7029 Acyrthosiphon pisum 100160866
6087 Hydra magnipapillata 100214385 30195 Bombus terrestris 100648012
132113 Bombus impatiens 100741454 34638 Metaseiulus occidentalis 100907287
9597 Pan paniscus 100973412 9555 Papio anubis 101002449
39432 Saimiri boliviensis 101035144 9595 Gorilla gorilla 101133967
9669 Mustela putorius furo 101684848 10090 Mus musculus 19687
7227 Drosophila melanogaster 40607 9615 Canis familiaris 479112
7668 Strongylocentrotus purpuratus 593379 7070 Tribolium castaneum 656183
9544 Macaca mulatta 698987 28377 Anolis carolinensis ENSACAG00000007579
9646 Ailuropoda melanoleuca ENSAMEG00000003216 9913 Bos taurus ENSBTAG00000014515
9358 Choloepus hoffmanni ENSCHOG00000012289 7719 Ciona intestinalis ENSCING00000005344
10141 Cavia porcellus ENSCPOG00000004248 51511 Ciona savignyi ENSCSAVG00000000485
9361 Dasypus novemcinctus ENSDNOG00000004694 10020 Dipodomys ordii ENSDORG00000010527
9796 Equus caballus ENSECAG00000024126 9365 Erinaceus europaeus ENSEEUG00000006198
9371 Echinops telfairi ENSETEG00000003990 9685 Felis catus ENSFCAG00000001781
69293 Gasterosteus aculeatus ENSGACG00000016149 9031 Gallus gallus ENSGALG00000014298
8049 Gadus morhua ENSGMOG00000000960 7897 Latimeria chalumnae ENSLACG00000003000
9785 Loxodonta africana ENSLAFG00000011467 9315 Macropus eugenii ENSMEUG00000003192
9103 Meleagris gallopavo ENSMGAG00000012310 30608 Microcebus murinus ENSMICG00000016765
59463 Myotis lucifugus ENSMLUG00000013981 13616 Monodelphis domestica ENSMODG00000020548
61853 Nomascus leucogenys ENSNLEG00000017090 9258 Ornithorhynchus anatinus ENSOANG00000010330
9986 Oryctolagus cuniculus ENSOCUG00000004739 30611 Otolemur garnettii ENSOGAG00000012292
8128 Oreochromis niloticus ENSONIG00000008987 9978 Ochotona princeps ENSOPRG00000009989
8090 Oryzias latipes ENSORLG00000005576 9813 Procavia capensis ENSPCAG00000012348
7757 Petromyzon marinus ENSPMAG00000007814 9601 Pongo abelii ENSPPYG00000014673
13735 Pelodiscus sinensis ENSPSIG00000008430 9598 Pan troglodytes ENSPTRG00000015991
132908 Pteropus vampyrus ENSPVAG00000002121 10116 Rattus norvegicus ENSRNOG00000002855
42254 Sorex araneus ENSSARG00000012034 9305 Sarcophilus harrisii ENSSHAG00000005764
9823 Sus scrofa ENSSSCG00000008788 43179 Ictidomys tridecemlineatus ENSSTOG00000007088
37347 Tupaia belangeri ENSTBEG00000003087 59729 Taeniopygia guttata ENSTGUG00000008901
99883 Tetraodon nigroviridis ENSTNIG00000005606 31033 Takifugu rubripes ENSTRUG00000008937
9478 Tarsius syrichta ENSTSYG00000013946 9739 Tursiops truncatus ENSTTRG00000014283
30538 Vicugna pacos ENSVPAG00000002020 8083 Xiphophorus maculatus ENSXMAG00000009566