Basic Information | |||
Gene ID | 100972687 | ||
Gene Name | TAF4B | ||
Full Name | PREDICTED: transcription initiation factor TFIID subunit 4B [Panpaniscus]. | ||
Organism | Pan paniscus [9597] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003830320 | Gene3D | G3DSA:1.10.20.10 | IPR009072 | 653 | 702 | 1.50e-24 | Histone-fold |
XP_003830320 | Pfam | PF05236 | IPR007900 | 616 | 859 | 6.90e-80 | Transcription initiation factor TFIID component TAF4 |
XP_003830320 | Pfam | PF07531 | IPR003894 | 257 | 350 | 4.80e-37 | TAFH/NHR1 |
XP_003830320 | ProSiteProfiles | PS51119 | IPR003894 | 256 | 353 | 0.00e-00 | TAFH/NHR1 |
XP_003830320 | SMART | SM00549 | IPR003894 | 258 | 350 | 1.40e-40 | TAFH/NHR1 |
XP_003830320 | SUPERFAMILY | SSF47113 | IPR009072 | 654 | 701 | 0.00e-00 | Histone-fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003830320 | PF05236 | 0 | TAF4 | Transcription initiation factor TFIID component TAF4 family |
XP_003830320 | PF07531 | 1.5e-37 | TAFH | NHR1 homology to TAF |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003830320 | GO:0006352 | biological_process | DNA-templated transcription, initiation |
XP_003830320 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
XP_003830320 | GO:0006367 | biological_process | transcription initiation from RNA polymerase II promoter |
XP_003830320 | GO:0006368 | biological_process | transcription elongation from RNA polymerase II promoter |
XP_003830320 | GO:0010467 | biological_process | gene expression |
XP_003830320 | GO:0016032 | biological_process | viral process |
XP_003830320 | GO:0005634 | cellular_component | nucleus |
XP_003830320 | GO:0005654 | cellular_component | nucleoplasm |
XP_003830320 | GO:0005669 | cellular_component | transcription factor TFIID complex |
XP_003830320 | GO:0005730 | cellular_component | nucleolus |
XP_003830320 | GO:0005737 | cellular_component | cytoplasm |
XP_003830320 | GO:0003677 | molecular_function | DNA binding |
XP_003830320 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
XP_003830320 | GO:0046982 | molecular_function | protein heterodimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9986 | Oryctolagus cuniculus | 100349838 | 9601 | Pongo abelii | 100450673 |
9785 | Loxodonta africana | 100677252 | 6087 | Hydra magnipapillata | 100207984 |
9606 | Homo sapiens | 6875 | 28377 | Anolis carolinensis | ENSACAG00000002056 |
10141 | Cavia porcellus | ENSCPOG00000001414 | 10020 | Dipodomys ordii | ENSDORG00000014517 |
9685 | Felis catus | ENSFCAG00000011715 | 7897 | Latimeria chalumnae | ENSLACG00000010597 |
10116 | Rattus norvegicus | ENSRNOG00000026023 | 9305 | Sarcophilus harrisii | ENSSHAG00000016570 |
9739 | Tursiops truncatus | ENSTTRG00000014587 | 9555 | Papio anubis | 101015450 |
39432 | Saimiri boliviensis | 101040641 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000014196 |
9913 | Bos taurus | ENSBTAG00000004257 | 9358 | Choloepus hoffmanni | ENSCHOG00000007830 |
7719 | Ciona intestinalis | ENSCING00000009553 | 9483 | Callithrix jacchus | ENSCJAG00000020711 |
9796 | Equus caballus | ENSECAG00000016769 | 9371 | Echinops telfairi | ENSETEG00000011393 |
9031 | Gallus gallus | ENSGALG00000015122 | 9595 | Gorilla gorilla | ENSGGOG00000003977 |
9315 | Macropus eugenii | ENSMEUG00000009323 | 9103 | Meleagris gallopavo | ENSMGAG00000010380 |
30608 | Microcebus murinus | ENSMICG00000007838 | 59463 | Myotis lucifugus | ENSMLUG00000016736 |
9544 | Macaca mulatta | ENSMMUG00000016190 | 13616 | Monodelphis domestica | ENSMODG00000021512 |
9669 | Mustela putorius furo | ENSMPUG00000006462 | 30611 | Otolemur garnettii | ENSOGAG00000014592 |
9978 | Ochotona princeps | ENSOPRG00000010329 | 13735 | Pelodiscus sinensis | ENSPSIG00000002612 |
9598 | Pan troglodytes | ENSPTRG00000009934 | 132908 | Pteropus vampyrus | ENSPVAG00000009968 |
42254 | Sorex araneus | ENSSARG00000006618 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000015714 |
37347 | Tupaia belangeri | ENSTBEG00000002967 | 59729 | Taeniopygia guttata | ENSTGUG00000010600 |
99883 | Tetraodon nigroviridis | ENSTNIG00000010523 | 9478 | Tarsius syrichta | ENSTSYG00000009936 |
30538 | Vicugna pacos | ENSVPAG00000011346 | 8364 | Xenopus tropicalis | ENSXETG00000032722 |