Basic Information | |||
Gene ID | 100998031 | ||
Gene Name | HMGB2 | ||
Full Name | PREDICTED: high mobility group protein B2 isoform 1 [Papio anubis]. | ||
Organism | Papio anubis [9555] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003899416 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 8 | 78 | 1.10e-28 | High mobility group box domain |
XP_003899416 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 93 | 167 | 8.80e-31 | High mobility group box domain |
XP_003899416 | Pfam | PF00505 | IPR009071 | 95 | 163 | 2.10e-26 | High mobility group box domain |
XP_003899416 | Pfam | PF09011 | IPR009071 | 6 | 78 | 3.80e-28 | High mobility group box domain |
XP_003899416 | ProSitePatterns | PS00353 | IPR017967 | 41 | 52 | - | HMG box A DNA-binding domain, conserved site |
XP_003899416 | ProSiteProfiles | PS50118 | IPR009071 | 95 | 163 | 0.00e-00 | High mobility group box domain |
XP_003899416 | ProSiteProfiles | PS50118 | IPR009071 | 9 | 79 | 0.00e-00 | High mobility group box domain |
XP_003899416 | SMART | SM00398 | IPR009071 | 8 | 80 | 1.60e-27 | High mobility group box domain |
XP_003899416 | SMART | SM00398 | IPR009071 | 94 | 164 | 1.40e-33 | High mobility group box domain |
XP_003899416 | SUPERFAMILY | SSF47095 | IPR009071 | 3 | 81 | 0.00e-00 | High mobility group box domain |
XP_003899416 | SUPERFAMILY | SSF47095 | IPR009071 | 79 | 164 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003899416 | PF09011 | 5.60519e-45 | HMG_box_2 | HMG-box domain |
XP_003899416 | PF00505 | 2.49431e-43 | HMG_box | HMG (high mobility group) box |
XP_003899416 | PF14887 | 0.00047 | HMG_box_5 | HMG (high mobility group) box 5 |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003899416 | GO:0006288 | biological_process | base-excision repair, DNA ligation |
XP_003899416 | GO:0006357 | biological_process | regulation of transcription from RNA polymerase II promoter |
XP_003899416 | GO:0000793 | cellular_component | condensed chromosome |
XP_003899416 | GO:0005634 | cellular_component | nucleus |
XP_003899416 | GO:0003677 | molecular_function | DNA binding |
XP_003899416 | GO:0008301 | molecular_function | DNA binding, bending |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
400682 | Amphimedon queenslandica | 100635010 | 9986 | Oryctolagus cuniculus | 100356612 |
9483 | Callithrix jacchus | 100401463 | 9646 | Ailuropoda melanoleuca | 100482413 |
61853 | Nomascus leucogenys | 100587901 | 9597 | Pan paniscus | 100981686 |
9685 | Felis catus | 101088835 | 9595 | Gorilla gorilla | 101125800 |
9669 | Mustela putorius furo | 101675666 | 43179 | Ictidomys tridecemlineatus | 101972571 |
9358 | Choloepus hoffmanni | ENSCHOG00000005765 | 9361 | Dasypus novemcinctus | ENSDNOG00000019440 |
9371 | Echinops telfairi | ENSETEG00000010379 | 9315 | Macropus eugenii | ENSMEUG00000002256 |
9103 | Meleagris gallopavo | ENSMGAG00000006836 | 30608 | Microcebus murinus | ENSMICG00000016477 |
59463 | Myotis lucifugus | ENSMLUG00000026303 | 9544 | Macaca mulatta | ENSMMUG00000003187 |
7757 | Petromyzon marinus | ENSPMAG00000008313 | 132908 | Pteropus vampyrus | ENSPVAG00000014656 |
9305 | Sarcophilus harrisii | ENSSHAG00000012461 | 9739 | Tursiops truncatus | ENSTTRG00000015650 |
39432 | Saimiri boliviensis | 101048050 | 13735 | Pelodiscus sinensis | 102455330 |
7955 | Danio rerio | 447936 | 10090 | Mus musculus | 97165 |
9913 | Bos taurus | ENSBTAG00000020685 | 9365 | Erinaceus europaeus | ENSEEUG00000012238 |
9031 | Gallus gallus | ENSGALG00000010745 | 9785 | Loxodonta africana | ENSLAFG00000030388 |
8090 | Oryzias latipes | ENSORLG00000018492 | 9823 | Sus scrofa | ENSSSCG00000009704 |
Paralogs | |||
100137373 | 101008481 | 101019418 | 101001750 |
101004102 | 101026485 |