Basic Information | |||
Gene ID | 100999025 | ||
Gene Name | ARID4B | ||
Full Name | PREDICTED: AT-rich interactive domain-containing protein 4B,partial [Papio anubis]. | ||
Organism | Papio anubis [9555] |
Cross Reference | |||
UniProt | NULL | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
XP_003893797 | Gene3D | G3DSA:1.10.150.60 | IPR001606 | 295 | 407 | 4.30e-39 | ARID/BRIGHT DNA-binding domain |
XP_003893797 | Gene3D | G3DSA:3.30.70.330 | IPR012677 | 1572 | 1668 | 6.20e-16 | Nucleotide-binding, alpha-beta plait |
XP_003893797 | Gene3D | G3DSA:3.30.70.330 | IPR012677 | 1674 | 1753 | 1.30e-24 | Nucleotide-binding, alpha-beta plait |
XP_003893797 | PANTHER | PTHR13964:SF3 | IPR028853 | 1 | 1320 | 0.00e-00 | AT-rich interactive domain-containing protein 4B |
XP_003893797 | Pfam | PF00076 | IPR000504 | 1574 | 1606 | 2.60e-06 | RNA recognition motif domain |
XP_003893797 | Pfam | PF00076 | IPR000504 | 1676 | 1745 | 2.60e-15 | RNA recognition motif domain |
XP_003893797 | Pfam | PF01388 | IPR001606 | 305 | 392 | 2.20e-24 | ARID/BRIGHT DNA-binding domain |
XP_003893797 | Pfam | PF08169 | IPR012603 | 164 | 262 | 2.30e-41 | RBB1NT |
XP_003893797 | Pfam | PF11717 | IPR025995 | 571 | 623 | 7.50e-12 | RNA binding activity-knot of a chromodomain |
XP_003893797 | ProSiteProfiles | PS50102 | IPR000504 | 1572 | 1667 | 0.00e-00 | RNA recognition motif domain |
XP_003893797 | ProSiteProfiles | PS50102 | IPR000504 | 1674 | 1751 | 0.00e-00 | RNA recognition motif domain |
XP_003893797 | ProSiteProfiles | PS51011 | IPR001606 | 304 | 396 | 0.00e-00 | ARID/BRIGHT DNA-binding domain |
XP_003893797 | SMART | SM00298 | IPR000953 | 504 | 639 | 3.90e-03 | Chromo domain/shadow |
XP_003893797 | SMART | SM00333 | IPR002999 | 56 | 112 | 2.10e-11 | Tudor domain |
XP_003893797 | SMART | SM00333 | IPR002999 | 566 | 631 | 2.30e-01 | Tudor domain |
XP_003893797 | SMART | SM00360 | IPR000504 | 1573 | 1663 | 9.20e-11 | RNA recognition motif domain |
XP_003893797 | SMART | SM00360 | IPR000504 | 1675 | 1747 | 3.00e-23 | RNA recognition motif domain |
XP_003893797 | SMART | SM00501 | IPR001606 | 305 | 397 | 2.00e-38 | ARID/BRIGHT DNA-binding domain |
XP_003893797 | SUPERFAMILY | SSF46774 | IPR001606 | 303 | 404 | 0.00e-00 | ARID/BRIGHT DNA-binding domain |
XP_003893797 | SUPERFAMILY | SSF54160 | IPR016197 | 557 | 683 | 0.00e-00 | Chromo domain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
XP_003893797 | PF08169 | 2.29995e-41 | RBB1NT | RBB1NT (NUC162) domain |
XP_003893797 | PF00076 | 8.7e-27 | RRM_1 | RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) |
XP_003893797 | PF01388 | 6e-25 | ARID | ARID/BRIGHT DNA binding domain |
XP_003893797 | PF14259 | 2.2e-19 | RRM_6 | RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) |
XP_003893797 | PF11717 | 3e-12 | Tudor-knot | RNA binding activity-knot of a chromodomain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
XP_003893797 | GO:0005634 | cellular_component | nucleus |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
143995 | Megachile rotundata | 100882595 | 9597 | Pan paniscus | 100976721 |
7425 | Nasonia vitripennis | 100115059 | 7029 | Acyrthosiphon pisum | 100574162 |
400682 | Amphimedon queenslandica | 100639816 | 132113 | Bombus impatiens | 100743357 |
10029 | Cricetulus griseus | 100752333 | 34638 | Metaseiulus occidentalis | 100902621 |
39432 | Saimiri boliviensis | 101053919 | 9031 | Gallus gallus | 425840 |
9598 | Pan troglodytes | 457835 | 7070 | Tribolium castaneum | 660367 |
10090 | Mus musculus | 94246 | 9361 | Dasypus novemcinctus | ENSDNOG00000005711 |
10020 | Dipodomys ordii | ENSDORG00000006422 | 9796 | Equus caballus | ENSECAG00000017836 |
9371 | Echinops telfairi | ENSETEG00000005596 | 9685 | Felis catus | ENSFCAG00000030096 |
69293 | Gasterosteus aculeatus | ENSGACG00000004298 | 9595 | Gorilla gorilla | ENSGGOG00000022080 |
8049 | Gadus morhua | ENSGMOG00000018747 | 9785 | Loxodonta africana | ENSLAFG00000014295 |
9103 | Meleagris gallopavo | ENSMGAG00000011896 | 59463 | Myotis lucifugus | ENSMLUG00000016232 |
9544 | Macaca mulatta | ENSMMUG00000007141 | 13616 | Monodelphis domestica | ENSMODG00000008417 |
9986 | Oryctolagus cuniculus | ENSOCUG00000006605 | 30611 | Otolemur garnettii | ENSOGAG00000012476 |
8128 | Oreochromis niloticus | ENSONIG00000010098 | 9978 | Ochotona princeps | ENSOPRG00000013949 |
9813 | Procavia capensis | ENSPCAG00000003915 | 13735 | Pelodiscus sinensis | ENSPSIG00000011632 |
132908 | Pteropus vampyrus | ENSPVAG00000015159 | 10116 | Rattus norvegicus | ENSRNOG00000016391 |
9305 | Sarcophilus harrisii | ENSSHAG00000015214 | 9823 | Sus scrofa | ENSSSCG00000010156 |
37347 | Tupaia belangeri | ENSTBEG00000003961 | 99883 | Tetraodon nigroviridis | ENSTNIG00000016655 |
9478 | Tarsius syrichta | ENSTSYG00000010028 | 9739 | Tursiops truncatus | ENSTTRG00000002228 |
30538 | Vicugna pacos | ENSVPAG00000006841 | 8364 | Xenopus tropicalis | ENSXETG00000024651 |
9669 | Mustela putorius furo | 101685293 | 43179 | Ictidomys tridecemlineatus | 101965313 |
28377 | Anolis carolinensis | ENSACAG00000001289 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000008801 |
9913 | Bos taurus | ENSBTAG00000000222 | 9365 | Erinaceus europaeus | ENSEEUG00000005378 |
9315 | Macropus eugenii | ENSMEUG00000011304 | 30608 | Microcebus murinus | ENSMICG00000016358 |
9258 | Ornithorhynchus anatinus | ENSOANG00000001208 | 8090 | Oryzias latipes | ENSORLG00000012510 |
7757 | Petromyzon marinus | ENSPMAG00000005967 | 42254 | Sorex araneus | ENSSARG00000011948 |
59729 | Taeniopygia guttata | ENSTGUG00000010246 | 8083 | Xiphophorus maculatus | ENSXMAG00000006538 |
7227 | Drosophila melanogaster | FBgn0085451 |