Basic Information | |||
Gene ID | 102076274 | ||
Gene Name | TAF4 (2 of 2) | ||
Full Name | Uncharacterized protein | ||
Organism | Oreochromis niloticus [8128] |
Cross Reference | |||
UniProt | I3KWV5 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSONIP00000025601 | Gene3D | G3DSA:1.10.20.10 | IPR009072 | 641 | 689 | 2.00e-21 | Histone-fold |
ENSONIP00000025601 | Pfam | PF05236 | IPR007900 | 603 | 850 | 1.00e-84 | Transcription initiation factor TFIID component TAF4 |
ENSONIP00000025601 | Pfam | PF07531 | IPR003894 | 378 | 471 | 1.70e-38 | TAFH/NHR1 |
ENSONIP00000025601 | ProSiteProfiles | PS51119 | IPR003894 | 377 | 474 | 0.00e-00 | TAFH/NHR1 |
ENSONIP00000025601 | SMART | SM00549 | IPR003894 | 379 | 472 | 1.90e-50 | TAFH/NHR1 |
ENSONIP00000025601 | SUPERFAMILY | SSF47113 | IPR009072 | 641 | 688 | 0.00e-00 | Histone-fold |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSONIP00000025601 | PF05236 | 0 | TAF4 | Transcription initiation factor TFIID component TAF4 family |
ENSONIP00000025601 | PF07531 | 4e-39 | TAFH | NHR1 homology to TAF |
ENSONIP00000025601 | PF12767 | 0.00041 | SAGA-Tad1 | Transcriptional regulator of RNA polII, SAGA, subunit |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSONIP00000025601 | GO:0006352 | biological_process | DNA-templated transcription, initiation |
ENSONIP00000025601 | GO:0006366 | biological_process | transcription from RNA polymerase II promoter |
ENSONIP00000025601 | GO:0006367 | biological_process | transcription initiation from RNA polymerase II promoter |
ENSONIP00000025601 | GO:0006368 | biological_process | transcription elongation from RNA polymerase II promoter |
ENSONIP00000025601 | GO:0010467 | biological_process | gene expression |
ENSONIP00000025601 | GO:0016032 | biological_process | viral process |
ENSONIP00000025601 | GO:0005634 | cellular_component | nucleus |
ENSONIP00000025601 | GO:0005654 | cellular_component | nucleoplasm |
ENSONIP00000025601 | GO:0005669 | cellular_component | transcription factor TFIID complex |
ENSONIP00000025601 | GO:0005730 | cellular_component | nucleolus |
ENSONIP00000025601 | GO:0005737 | cellular_component | cytoplasm |
ENSONIP00000025601 | GO:0003677 | molecular_function | DNA binding |
ENSONIP00000025601 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSONIP00000025601 | GO:0046982 | molecular_function | protein heterodimerization activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9555 | Papio anubis | 101000177 | 7070 | Tribolium castaneum | 654970 |
69293 | Gasterosteus aculeatus | ENSGACG00000009979 | 8049 | Gadus morhua | ENSGMOG00000017138 |
7897 | Latimeria chalumnae | ENSLACG00000000501 | 30608 | Microcebus murinus | ENSMICG00000004029 |
8090 | Oryzias latipes | ENSORLG00000013539 | 99883 | Tetraodon nigroviridis | ENSTNIG00000007089 |
31033 | Takifugu rubripes | ENSTRUG00000011488 |