Basic Information | |||
Gene ID | 102451794 | ||
Gene Name | HMG20B | ||
Full Name | Uncharacterized protein | ||
Organism | Pelodiscus sinensis [13735] |
Cross Reference | |||
UniProt | K7FVZ4 | UniGene | NULL |
PDB | NULL | OMIM | NULL |
KEGG | NULL | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSPSIP00000012204 | Gene3D | G3DSA:1.10.30.10 | IPR009071 | 60 | 143 | 1.20e-23 | High mobility group box domain |
ENSPSIP00000012204 | Pfam | PF00505 | IPR009071 | 69 | 137 | 9.00e-19 | High mobility group box domain |
ENSPSIP00000012204 | ProSiteProfiles | PS50118 | IPR009071 | 69 | 137 | 0.00e-00 | High mobility group box domain |
ENSPSIP00000012204 | SMART | SM00398 | IPR009071 | 68 | 138 | 1.90e-25 | High mobility group box domain |
ENSPSIP00000012204 | SUPERFAMILY | SSF47095 | IPR009071 | 55 | 138 | 0.00e-00 | High mobility group box domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSPSIP00000012204 | PF00505 | 9e-19 | HMG_box | HMG (high mobility group) box |
ENSPSIP00000012204 | PF09011 | 2.3e-12 | HMG_box_2 | HMG-box domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSPSIP00000012204 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSPSIP00000012204 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSPSIP00000012204 | GO:0005634 | cellular_component | nucleus |
ENSPSIP00000012204 | GO:0003677 | molecular_function | DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
10141 | Cavia porcellus | 100717032 | 30611 | Otolemur garnettii | 100952084 |
9597 | Pan paniscus | 100986113 | 9555 | Papio anubis | 101023962 |
39432 | Saimiri boliviensis | 101034172 | 43179 | Ictidomys tridecemlineatus | 101968260 |
9785 | Loxodonta africana | ENSLAFG00000007845 | 9103 | Meleagris gallopavo | ENSMGAG00000001362 |
8083 | Xiphophorus maculatus | ENSXMAG00000012647 | 8364 | Xenopus tropicalis | 394538 |
7955 | Danio rerio | 553572 | 9646 | Ailuropoda melanoleuca | ENSAMEG00000005678 |
9615 | Canis familiaris | ENSCAFG00000019215 | 9483 | Callithrix jacchus | ENSCJAG00000003488 |
10020 | Dipodomys ordii | ENSDORG00000012598 | 9685 | Felis catus | ENSFCAG00000026167 |
69293 | Gasterosteus aculeatus | ENSGACG00000012785 | 9031 | Gallus gallus | ENSGALG00000027838 |
9595 | Gorilla gorilla | ENSGGOG00000014805 | 8049 | Gadus morhua | ENSGMOG00000011717 |
9315 | Macropus eugenii | ENSMEUG00000001270 | 59463 | Myotis lucifugus | ENSMLUG00000022392 |
13616 | Monodelphis domestica | ENSMODG00000006884 | 9669 | Mustela putorius furo | ENSMPUG00000003925 |
61853 | Nomascus leucogenys | ENSNLEG00000002693 | 9258 | Ornithorhynchus anatinus | ENSOANG00000013515 |
8128 | Oreochromis niloticus | ENSONIG00000004838 | 8090 | Oryzias latipes | ENSORLG00000004640 |
9813 | Procavia capensis | ENSPCAG00000010772 | 9601 | Pongo abelii | ENSPPYG00000009378 |
9598 | Pan troglodytes | ENSPTRG00000010268 | 132908 | Pteropus vampyrus | ENSPVAG00000004300 |
59729 | Taeniopygia guttata | ENSTGUG00000000169 | 99883 | Tetraodon nigroviridis | ENSTNIG00000010630 |