Basic Information | |||
Gene ID | 181581 | ||
Gene Name | dmd-4; C27C12.6, CELE_C27C12.6 | ||
Full Name | Protein DMD-4 | ||
Organism | Caenorhabditis elegans [6239] |
Cross Reference | |||
UniProt | Q18248 | UniGene | Cel.11291 |
PDB | NULL | OMIM | NULL |
KEGG | cel:CELE_C27C12.6 | UCSC | C27C12.6 |
Protein Interactions | |
DIP | NULL |
IntAct | Q18248 |
MINT | NULL |
STRING | 6239.C27C12.6 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
C27C12.6 | Gene3D | G3DSA:4.10.1040.10 | IPR001275 | 15 | 64 | 1.20e-25 | DM DNA-binding domain |
C27C12.6 | PANTHER | PTHR12322 | IPR026607 | 1 | 117 | 0.00e-00 | DMRT/protein doublesex/protein male abnormal 3 |
C27C12.6 | Pfam | PF00751 | IPR001275 | 18 | 64 | 8.50e-23 | DM DNA-binding domain |
C27C12.6 | Pfam | PF03474 | IPR005173 | 143 | 181 | 6.80e-21 | DMRTA motif |
C27C12.6 | ProSitePatterns | PS40000 | IPR001275 | 22 | 51 | - | DM DNA-binding domain |
C27C12.6 | ProSiteProfiles | PS50809 | IPR001275 | 22 | 69 | 0.00e-00 | DM DNA-binding domain |
C27C12.6 | SMART | SM00301 | IPR001275 | 18 | 71 | 4.50e-30 | DM DNA-binding domain |
C27C12.6 | SUPERFAMILY | SSF82927 | IPR001275 | 16 | 64 | 0.00e-00 | DM DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
C27C12.6 | PF00751 | 5.2e-23 | DM | DM DNA binding domain |
C27C12.6 | PF03474 | 3.4e-21 | DMA | DMRTA motif |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
C27C12.6 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
C27C12.6 | GO:0005634 | cellular_component | nucleus |
C27C12.6 | GO:0003677 | molecular_function | DNA binding |
C27C12.6 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
C27C12.6 | GO:0043565 | molecular_function | sequence-specific DNA binding |
C27C12.6 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8128 | Oreochromis niloticus | 100702892 | 7463 | Apis florea | 100865350 |
43179 | Ictidomys tridecemlineatus | 101960283 | 7425 | Nasonia vitripennis | 100119596 |
7029 | Acyrthosiphon pisum | 100167026 | 10224 | Saccoglossus kowalevskii | 100329077 |
30195 | Bombus terrestris | 100642233 | 132113 | Bombus impatiens | 100747605 |
143995 | Megachile rotundata | 100875079 | 7668 | Strongylocentrotus purpuratus | 100888349 |
30611 | Otolemur garnettii | 100954455 | 9595 | Gorilla gorilla | 101136888 |
7227 | Drosophila melanogaster | 42494 | 9031 | Gallus gallus | 431641 |
7955 | Danio rerio | 450035 | 9606 | Homo sapiens | 58524 |
9913 | Bos taurus | ENSBTAG00000017800 | 9361 | Dasypus novemcinctus | ENSDNOG00000004047 |
10020 | Dipodomys ordii | ENSDORG00000006366 | 69293 | Gasterosteus aculeatus | ENSGACG00000014511 |
8049 | Gadus morhua | ENSGMOG00000014320 | 7897 | Latimeria chalumnae | ENSLACG00000012023 |
61853 | Nomascus leucogenys | ENSNLEG00000008556 | 9258 | Ornithorhynchus anatinus | ENSOANG00000008295 |
99883 | Tetraodon nigroviridis | ENSTNIG00000015641 | 31033 | Takifugu rubripes | ENSTRUG00000015692 |
8364 | Xenopus tropicalis | ENSXETG00000015285 | 10090 | Mus musculus | 240590 |
9615 | Canis familiaris | ENSCAFG00000023150 | 30608 | Microcebus murinus | ENSMICG00000010423 |
9978 | Ochotona princeps | ENSOPRG00000011113 | 8083 | Xiphophorus maculatus | ENSXMAG00000015600 |