Basic Information
Gene ID 20672 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Sox18; Sox-18
Full Name Transcription factor SOX-18
Organism Mus musculus [10090]

Cross Reference
UniProt P43680 UniGene Mm.264904
PDB NULL OMIM NULL
KEGG mmu:20672 UCSC uc008ona.1

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSMUSP00000062759 Gene3D G3DSA:1.10.30.10 IPR009071 78 154 3.60e-32 High mobility group box domain
ENSMUSP00000062759 Pfam PF00505 IPR009071 79 147 3.40e-24 High mobility group box domain
ENSMUSP00000062759 Pfam PF12067 IPR021934 187 375 7.90e-59 Sox C-terminal transactivation domain
ENSMUSP00000062759 ProSiteProfiles PS50118 IPR009071 79 147 0.00e-00 High mobility group box domain
ENSMUSP00000062759 ProSiteProfiles PS51516 IPR021934 256 376 0.00e-00 Sox C-terminal transactivation domain
ENSMUSP00000062759 SMART SM00398 IPR009071 78 148 1.40e-29 High mobility group box domain
ENSMUSP00000062759 SUPERFAMILY SSF47095 IPR009071 73 151 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSMUSP00000062759 PF12067 0 Sox_C_TAD Sox C-terminal transactivation domain
ENSMUSP00000062759 PF00505 2.2e-24 HMG_box HMG (high mobility group) box
ENSMUSP00000062759 PF09011 1.7e-09 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSMUSP00000062759 GO:0006351 biological_process transcription, DNA-templated
ENSMUSP00000062759 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSMUSP00000062759 GO:0007275 biological_process multicellular organismal development
ENSMUSP00000062759 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSMUSP00000062759 GO:0005634 cellular_component nucleus
ENSMUSP00000062759 GO:0003677 molecular_function DNA binding
ENSMUSP00000062759 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
59729 Taeniopygia guttata 100224917 28377 Anolis carolinensis 100556585
9555 Papio anubis 101002038 43179 Ictidomys tridecemlineatus 101973435
7897 Latimeria chalumnae 102347767 10141 Cavia porcellus 100727175
10029 Cricetulus griseus 100767412 10116 Rattus norvegicus 311723
10020 Dipodomys ordii ENSDORG00000008388 9315 Macropus eugenii ENSMEUG00000016410
61853 Nomascus leucogenys ENSNLEG00000010228 13735 Pelodiscus sinensis ENSPSIG00000009637
132908 Pteropus vampyrus ENSPVAG00000014320 9739 Tursiops truncatus ENSTTRG00000005878
9615 Canis familiaris 485984 9544 Macaca mulatta 694156
9913 Bos taurus ENSBTAG00000011662 7719 Ciona intestinalis ENSCING00000007173
9483 Callithrix jacchus ENSCJAG00000022379 51511 Ciona savignyi ENSCSAVG00000008188
9371 Echinops telfairi ENSETEG00000001816 9103 Meleagris gallopavo ENSMGAG00000006624
13616 Monodelphis domestica ENSMODG00000017052 30611 Otolemur garnettii ENSOGAG00000034932
9813 Procavia capensis ENSPCAG00000015663 9598 Pan troglodytes ENSPTRG00000030459
9305 Sarcophilus harrisii ENSSHAG00000016686 8083 Xiphophorus maculatus ENSXMAG00000009334