Basic Information | |||
Gene ID | 227644 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Snapc4 | ||
Full Name | snRNA-activating protein complex subunit 4 | ||
Organism | Mus musculus [10090] |
Cross Reference | |||
UniProt | Q8BP86 | UniGene | Mm.207460 |
PDB | NULL | OMIM | NULL |
KEGG | mmu:227644 | UCSC | uc008iuw.2 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10090.ENSMUSP00000109750 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSMUSP00000109750 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 304 | 361 | 1.90e-11 | Homeodomain-like |
ENSMUSP00000109750 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 362 | 414 | 4.40e-10 | Homeodomain-like |
ENSMUSP00000109750 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 415 | 467 | 4.20e-19 | Homeodomain-like |
ENSMUSP00000109750 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 468 | 509 | 3.60e-15 | Homeodomain-like |
ENSMUSP00000109750 | ProSiteProfiles | PS50090 | IPR017877 | 258 | 296 | 0.00e-00 | Myb-like domain |
ENSMUSP00000109750 | ProSiteProfiles | PS50090 | IPR017877 | 352 | 403 | 0.00e-00 | Myb-like domain |
ENSMUSP00000109750 | ProSiteProfiles | PS51294 | IPR017930 | 297 | 353 | 0.00e-00 | Myb domain |
ENSMUSP00000109750 | ProSiteProfiles | PS51294 | IPR017930 | 404 | 459 | 0.00e-00 | Myb domain |
ENSMUSP00000109750 | ProSiteProfiles | PS51294 | IPR017930 | 460 | 511 | 0.00e-00 | Myb domain |
ENSMUSP00000109750 | SMART | SM00717 | IPR001005 | 227 | 298 | 1.20e-01 | SANT/Myb domain |
ENSMUSP00000109750 | SMART | SM00717 | IPR001005 | 301 | 351 | 2.10e-12 | SANT/Myb domain |
ENSMUSP00000109750 | SMART | SM00717 | IPR001005 | 353 | 405 | 1.50e-11 | SANT/Myb domain |
ENSMUSP00000109750 | SMART | SM00717 | IPR001005 | 408 | 457 | 4.30e-17 | SANT/Myb domain |
ENSMUSP00000109750 | SMART | SM00717 | IPR001005 | 460 | 509 | 4.00e-18 | SANT/Myb domain |
ENSMUSP00000109750 | SUPERFAMILY | SSF46689 | IPR009057 | 299 | 399 | 0.00e-00 | Homeodomain-like |
ENSMUSP00000109750 | SUPERFAMILY | SSF46689 | IPR009057 | 383 | 455 | 0.00e-00 | Homeodomain-like |
ENSMUSP00000109750 | SUPERFAMILY | SSF46689 | IPR009057 | 438 | 513 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSMUSP00000109750 | PF00249 | 1.5e-39 | Myb_DNA-binding | Myb-like DNA-binding domain |
ENSMUSP00000109750 | PF13921 | 9.5e-36 | Myb_DNA-bind_6 | Myb-like DNA-binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSMUSP00000109750 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSMUSP00000109750 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
ENSMUSP00000109750 | GO:0005634 | cellular_component | nucleus |
ENSMUSP00000109750 | GO:0003677 | molecular_function | DNA binding |
ENSMUSP00000109750 | GO:0003682 | molecular_function | chromatin binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9823 | Sus scrofa | 100152439 | 10029 | Cricetulus griseus | 100753578 |
34638 | Metaseiulus occidentalis | 100899521 | 9555 | Papio anubis | 101011277 |
13735 | Pelodiscus sinensis | 102448892 | 13616 | Monodelphis domestica | 100025499 |
7425 | Nasonia vitripennis | 100115386 | 7029 | Acyrthosiphon pisum | 100164371 |
9986 | Oryctolagus cuniculus | 100347664 | 30195 | Bombus terrestris | 100651444 |
8128 | Oreochromis niloticus | 100700889 | 132113 | Bombus impatiens | 100744142 |
7463 | Apis florea | 100864638 | 39432 | Saimiri boliviensis | 101033175 |
7460 | Apis mellifera | 409733 | 9606 | Homo sapiens | 4602 |
9615 | Canis familiaris | ENSCAFG00000000230 | 9358 | Choloepus hoffmanni | ENSCHOG00000010472 |
9483 | Callithrix jacchus | ENSCJAG00000007798 | 10141 | Cavia porcellus | ENSCPOG00000014607 |
9365 | Erinaceus europaeus | ENSEEUG00000001468 | 9685 | Felis catus | ENSFCAG00000001812 |
9103 | Meleagris gallopavo | ENSMGAG00000013053 | 30608 | Microcebus murinus | ENSMICG00000005531 |
59463 | Myotis lucifugus | ENSMLUG00000002125 | 61853 | Nomascus leucogenys | ENSNLEG00000014751 |
9258 | Ornithorhynchus anatinus | ENSOANG00000002777 | 30611 | Otolemur garnettii | ENSOGAG00000000056 |
9978 | Ochotona princeps | ENSOPRG00000013639 | 8090 | Oryzias latipes | ENSORLG00000016573 |
9598 | Pan troglodytes | ENSPTRG00000018631 | 9305 | Sarcophilus harrisii | ENSSHAG00000014728 |
31033 | Takifugu rubripes | ENSTRUG00000016069 | 9478 | Tarsius syrichta | ENSTSYG00000014301 |
9739 | Tursiops truncatus | ENSTTRG00000003718 | 7070 | Tribolium castaneum | 664494 |
28377 | Anolis carolinensis | ENSACAG00000009861 | 9796 | Equus caballus | ENSECAG00000009918 |
9031 | Gallus gallus | ENSGALG00000013956 | 7897 | Latimeria chalumnae | ENSLACG00000002813 |
9785 | Loxodonta africana | ENSLAFG00000018350 | 9544 | Macaca mulatta | ENSMMUG00000018166 |
7757 | Petromyzon marinus | ENSPMAG00000001639 | 132908 | Pteropus vampyrus | ENSPVAG00000007652 |
42254 | Sorex araneus | ENSSARG00000002855 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000007581 |
59729 | Taeniopygia guttata | ENSTGUG00000011495 | 99883 | Tetraodon nigroviridis | ENSTNIG00000016319 |
8083 | Xiphophorus maculatus | ENSXMAG00000004392 |