Basic Information | |||
Gene ID | 293624 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Irf7 | ||
Full Name | Interferon regulatory factor 7 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q3SWU2 | UniGene | Rn.101159 |
PDB | NULL | OMIM | NULL |
KEGG | rno:293624 | UCSC | RGD:1307828 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000023504 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000023504 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 12 | 126 | 4.90e-42 | Winged helix-turn-helix DNA-binding domain |
ENSRNOP00000023504 | Gene3D | G3DSA:2.60.200.10 | IPR017855 | 236 | 454 | 3.80e-74 | SMAD domain-like |
ENSRNOP00000023504 | Pfam | PF00605 | IPR001346 | 9 | 123 | 6.30e-39 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000023504 | Pfam | PF10401 | IPR019471 | 239 | 417 | 5.00e-51 | Interferon regulatory factor-3 |
ENSRNOP00000023504 | PRINTS | PR00267 | IPR001346 | 11 | 30 | 6.20e-22 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000023504 | PRINTS | PR00267 | IPR001346 | 37 | 50 | 6.20e-22 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000023504 | PRINTS | PR00267 | IPR001346 | 54 | 71 | 6.20e-22 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000023504 | PRINTS | PR00267 | IPR001346 | 85 | 107 | 6.20e-22 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000023504 | ProSitePatterns | PS00601 | IPR019817 | 30 | 62 | - | Interferon regulatory factor, conserved site |
ENSRNOP00000023504 | ProSiteProfiles | PS51507 | IPR001346 | 9 | 123 | 0.00e-00 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000023504 | SMART | SM00348 | IPR001346 | 5 | 124 | 1.00e-56 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000023504 | SUPERFAMILY | SSF49879 | IPR008984 | 232 | 446 | 0.00e-00 | SMAD/FHA domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000023504 | PF10401 | 0 | IRF-3 | Interferon-regulatory factor 3 |
ENSRNOP00000023504 | PF00605 | 2.8e-39 | IRF | Interferon regulatory factor transcription factor |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000023504 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000023504 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000023504 | GO:0005737 | cellular_component | cytoplasm |
ENSRNOP00000023504 | GO:0000975 | molecular_function | regulatory region DNA binding |
ENSRNOP00000023504 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9913 | Bos taurus | 100125591 | 10029 | Cricetulus griseus | 100755889 |
9823 | Sus scrofa | 100037289 | 9597 | Pan paniscus | 100991659 |
9555 | Papio anubis | 101005316 | 39432 | Saimiri boliviensis | 101034616 |
9606 | Homo sapiens | 3665 | 10090 | Mus musculus | 54123 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000010613 | 7955 | Danio rerio | ENSDARG00000045661 |
10020 | Dipodomys ordii | ENSDORG00000014096 | 9796 | Equus caballus | ENSECAG00000009744 |
9685 | Felis catus | ENSFCAG00000031821 | 69293 | Gasterosteus aculeatus | ENSGACG00000011372 |
9031 | Gallus gallus | ENSGALG00000014297 | 9595 | Gorilla gorilla | ENSGGOG00000008341 |
9785 | Loxodonta africana | ENSLAFG00000032120 | 9103 | Meleagris gallopavo | ENSMGAG00000009104 |
9669 | Mustela putorius furo | ENSMPUG00000008845 | 9258 | Ornithorhynchus anatinus | ENSOANG00000009982 |
9986 | Oryctolagus cuniculus | ENSOCUG00000002339 | 8128 | Oreochromis niloticus | ENSONIG00000014571 |
9813 | Procavia capensis | ENSPCAG00000010286 | 13735 | Pelodiscus sinensis | ENSPSIG00000015333 |
9598 | Pan troglodytes | ENSPTRG00000003126 | 132908 | Pteropus vampyrus | ENSPVAG00000006873 |
9305 | Sarcophilus harrisii | ENSSHAG00000004173 | 43179 | Ictidomys tridecemlineatus | ENSSTOG00000005711 |
99883 | Tetraodon nigroviridis | ENSTNIG00000011381 | 9615 | Canis familiaris | ENSCAFG00000006557 |
9483 | Callithrix jacchus | ENSCJAG00000012124 | 9361 | Dasypus novemcinctus | ENSDNOG00000006293 |
9371 | Echinops telfairi | ENSETEG00000004078 | 7897 | Latimeria chalumnae | ENSLACG00000015606 |
9315 | Macropus eugenii | ENSMEUG00000002236 | 9544 | Macaca mulatta | ENSMMUG00000004014 |
61853 | Nomascus leucogenys | ENSNLEG00000008419 | 9978 | Ochotona princeps | ENSOPRG00000005519 |
9601 | Pongo abelii | ENSPPYG00000002872 | 59729 | Taeniopygia guttata | ENSTGUG00000009838 |
31033 | Takifugu rubripes | ENSTRUG00000011418 | 9739 | Tursiops truncatus | ENSTTRG00000011148 |
8364 | Xenopus tropicalis | ENSXETG00000006030 |