Basic Information | |||
Gene ID | 294562 ; ![]() ![]() | ||
Gene Name | Pou5f1; Cdk2ap1-ps7, Cdk2ap1-ps8, Ddr1, E030032D13Rik,LOC224733l-9, Rpl22-ps, RT1-CE14, RT1-CE16, Tcf19; rCG_41815 | ||
Full Name | POU class 5 homeobox 1 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q6MG27 | UniGene | Rn.161748 |
PDB | NULL | OMIM | NULL |
KEGG | rno:294562 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001009178 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 226 | 273 | 1.10e-19 | Homeodomain-like |
NP_001009178 | Gene3D | G3DSA:1.10.260.40 | IPR010982 | 136 | 205 | 1.00e-37 | Lambda repressor-like, DNA-binding domain |
NP_001009178 | PANTHER | PTHR11636:SF15 | IPR015585 | 2 | 352 | 0.00e-00 | POU domain-containing protein, class 5/6 |
NP_001009178 | Pfam | PF00046 | IPR001356 | 224 | 280 | 1.40e-17 | Homeobox domain |
NP_001009178 | Pfam | PF00157 | IPR000327 | 133 | 205 | 1.50e-36 | POU-specific |
NP_001009178 | PRINTS | PR00028 | IPR013847 | 150 | 167 | 2.90e-37 | POU domain |
NP_001009178 | PRINTS | PR00028 | IPR013847 | 173 | 186 | 2.90e-37 | POU domain |
NP_001009178 | PRINTS | PR00028 | IPR013847 | 189 | 204 | 2.90e-37 | POU domain |
NP_001009178 | PRINTS | PR00028 | IPR013847 | 222 | 242 | 2.90e-37 | POU domain |
NP_001009178 | PRINTS | PR00028 | IPR013847 | 257 | 272 | 2.90e-37 | POU domain |
NP_001009178 | ProSitePatterns | PS00027 | IPR017970 | 256 | 279 | - | Homeobox, conserved site |
NP_001009178 | ProSitePatterns | PS00035 | IPR000327 | 149 | 161 | - | POU-specific |
NP_001009178 | ProSitePatterns | PS00465 | IPR000327 | 173 | 186 | - | POU-specific |
NP_001009178 | ProSiteProfiles | PS50071 | IPR001356 | 221 | 281 | 0.00e-00 | Homeobox domain |
NP_001009178 | ProSiteProfiles | PS51179 | IPR000327 | 131 | 205 | 0.00e-00 | POU-specific |
NP_001009178 | SMART | SM00352 | IPR000327 | 131 | 205 | 9.50e-50 | POU-specific |
NP_001009178 | SMART | SM00389 | IPR001356 | 223 | 285 | 7.40e-21 | Homeobox domain |
NP_001009178 | SUPERFAMILY | SSF46689 | IPR009057 | 223 | 287 | 0.00e-00 | Homeodomain-like |
NP_001009178 | SUPERFAMILY | SSF47413 | IPR010982 | 131 | 205 | 0.00e-00 | Lambda repressor-like, DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001009178 | PF00157 | 7.4e-37 | Pou | Pou domain - N-terminal to homeobox domain |
NP_001009178 | PF00046 | 7.6e-18 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001009178 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_001009178 | GO:0005634 | cellular_component | nucleus |
NP_001009178 | GO:0005737 | cellular_component | cytoplasm |
NP_001009178 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_001009178 | GO:0043565 | molecular_function | sequence-specific DNA binding |