Basic Information
Gene ID 294562 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Pou5f1; Cdk2ap1-ps7, Cdk2ap1-ps8, Ddr1, E030032D13Rik,LOC224733l-9, Rpl22-ps, RT1-CE14, RT1-CE16, Tcf19; rCG_41815
Full Name POU class 5 homeobox 1
Organism Rattus norvegicus [10116]

Cross Reference
UniProt Q6MG27 UniGene Rn.161748
PDB NULL OMIM NULL
KEGG rno:294562 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_001009178 Gene3D G3DSA:1.10.10.60 IPR009057 226 273 1.10e-19 Homeodomain-like
NP_001009178 Gene3D G3DSA:1.10.260.40 IPR010982 136 205 1.00e-37 Lambda repressor-like, DNA-binding domain
NP_001009178 PANTHER PTHR11636:SF15 IPR015585 2 352 0.00e-00 POU domain-containing protein, class 5/6
NP_001009178 Pfam PF00046 IPR001356 224 280 1.40e-17 Homeobox domain
NP_001009178 Pfam PF00157 IPR000327 133 205 1.50e-36 POU-specific
NP_001009178 PRINTS PR00028 IPR013847 150 167 2.90e-37 POU domain
NP_001009178 PRINTS PR00028 IPR013847 173 186 2.90e-37 POU domain
NP_001009178 PRINTS PR00028 IPR013847 189 204 2.90e-37 POU domain
NP_001009178 PRINTS PR00028 IPR013847 222 242 2.90e-37 POU domain
NP_001009178 PRINTS PR00028 IPR013847 257 272 2.90e-37 POU domain
NP_001009178 ProSitePatterns PS00027 IPR017970 256 279 - Homeobox, conserved site
NP_001009178 ProSitePatterns PS00035 IPR000327 149 161 - POU-specific
NP_001009178 ProSitePatterns PS00465 IPR000327 173 186 - POU-specific
NP_001009178 ProSiteProfiles PS50071 IPR001356 221 281 0.00e-00 Homeobox domain
NP_001009178 ProSiteProfiles PS51179 IPR000327 131 205 0.00e-00 POU-specific
NP_001009178 SMART SM00352 IPR000327 131 205 9.50e-50 POU-specific
NP_001009178 SMART SM00389 IPR001356 223 285 7.40e-21 Homeobox domain
NP_001009178 SUPERFAMILY SSF46689 IPR009057 223 287 0.00e-00 Homeodomain-like
NP_001009178 SUPERFAMILY SSF47413 IPR010982 131 205 0.00e-00 Lambda repressor-like, DNA-binding domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_001009178 PF00157 7.4e-37 Pou Pou domain - N-terminal to homeobox domain
NP_001009178 PF00046 7.6e-18 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_001009178 GO:0006351 biological_process transcription, DNA-templated
NP_001009178 GO:0005634 cellular_component nucleus
NP_001009178 GO:0005737 cellular_component cytoplasm
NP_001009178 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
NP_001009178 GO:0043565 molecular_function sequence-specific DNA binding