Basic Information | |||
Gene ID | 29589 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Pou3f4; Brn-4, Brn4, Otf9 | ||
Full Name | POU domain, class 3, transcription factor 4 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | P62516 | UniGene | Rn.33030 |
PDB | NULL | OMIM | NULL |
KEGG | rno:29589 | UCSC | RGD:61947 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_058948 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 260 | 335 | 2.90e-22 | Homeodomain-like |
NP_058948 | Gene3D | G3DSA:1.10.260.40 | IPR010982 | 192 | 259 | 7.90e-42 | Lambda repressor-like, DNA-binding domain |
NP_058948 | Pfam | PF00046 | IPR001356 | 279 | 335 | 9.00e-18 | Homeobox domain |
NP_058948 | Pfam | PF00157 | IPR000327 | 187 | 260 | 4.50e-40 | POU-specific |
NP_058948 | PIRSF | PIRSF002629 | IPR016362 | 1 | 357 | 1.30e-189 | Transcription factor, homeobox/POU |
NP_058948 | PRINTS | PR00028 | IPR013847 | 205 | 222 | 1.60e-46 | POU domain |
NP_058948 | PRINTS | PR00028 | IPR013847 | 228 | 241 | 1.60e-46 | POU domain |
NP_058948 | PRINTS | PR00028 | IPR013847 | 244 | 259 | 1.60e-46 | POU domain |
NP_058948 | PRINTS | PR00028 | IPR013847 | 277 | 297 | 1.60e-46 | POU domain |
NP_058948 | PRINTS | PR00028 | IPR013847 | 312 | 327 | 1.60e-46 | POU domain |
NP_058948 | ProSitePatterns | PS00027 | IPR017970 | 311 | 334 | - | Homeobox, conserved site |
NP_058948 | ProSitePatterns | PS00035 | IPR000327 | 204 | 216 | - | POU-specific |
NP_058948 | ProSitePatterns | PS00465 | IPR000327 | 228 | 241 | - | POU-specific |
NP_058948 | ProSiteProfiles | PS50071 | IPR001356 | 276 | 336 | 0.00e-00 | Homeobox domain |
NP_058948 | ProSiteProfiles | PS51179 | IPR000327 | 186 | 260 | 0.00e-00 | POU-specific |
NP_058948 | SMART | SM00352 | IPR000327 | 186 | 260 | 2.10e-56 | POU-specific |
NP_058948 | SMART | SM00389 | IPR001356 | 278 | 340 | 3.60e-21 | Homeobox domain |
NP_058948 | SUPERFAMILY | SSF46689 | IPR009057 | 264 | 336 | 0.00e-00 | Homeodomain-like |
NP_058948 | SUPERFAMILY | SSF47413 | IPR010982 | 187 | 260 | 0.00e-00 | Lambda repressor-like, DNA-binding domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_058948 | PF00157 | 2.6e-40 | Pou | Pou domain - N-terminal to homeobox domain |
NP_058948 | PF00046 | 2.6e-18 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_058948 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_058948 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
NP_058948 | GO:0007275 | biological_process | multicellular organismal development |
NP_058948 | GO:0005634 | cellular_component | nucleus |
NP_058948 | GO:0003677 | molecular_function | DNA binding |
NP_058948 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_058948 | GO:0043565 | molecular_function | sequence-specific DNA binding |