Basic Information | |||
Gene ID | 30140 | ||
Gene Name | clock | ||
Full Name | Uncharacterized protein | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q5RIV1 | UniGene | Dr.81289 |
PDB | NULL | OMIM | NULL |
KEGG | dre:30140 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7955.ENSDARP00000014377 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
ENSEMBL | |||
REFSEQ | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_571032 | Gene3D | G3DSA:4.10.280.10 | IPR011598 | 26 | 76 | 2.80e-12 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_571032 | Pfam | PF00010 | IPR011598 | 26 | 74 | 4.50e-09 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_571032 | Pfam | PF00989 | IPR013767 | 101 | 169 | 3.70e-07 | PAS fold |
NP_571032 | PRINTS | PR00785 | IPR001067 | 266 | 283 | 1.40e-11 | Nuclear translocator |
NP_571032 | PRINTS | PR00785 | IPR001067 | 40 | 55 | 1.40e-11 | Nuclear translocator |
NP_571032 | PRINTS | PR00785 | IPR001067 | 91 | 114 | 1.40e-11 | Nuclear translocator |
NP_571032 | ProSiteProfiles | PS50112 | IPR000014 | 276 | 323 | 0.00e-00 | PAS domain |
NP_571032 | ProSiteProfiles | PS50112 | IPR000014 | 98 | 168 | 0.00e-00 | PAS domain |
NP_571032 | ProSiteProfiles | PS50888 | IPR011598 | 25 | 75 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_571032 | SMART | SM00086 | IPR001610 | 327 | 370 | 3.00e-09 | PAC motif |
NP_571032 | SMART | SM00091 | IPR000014 | 100 | 166 | 3.90e-09 | PAS domain |
NP_571032 | SMART | SM00091 | IPR000014 | 255 | 321 | 7.80e-07 | PAS domain |
NP_571032 | SMART | SM00353 | IPR011598 | 31 | 81 | 9.50e-15 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_571032 | SUPERFAMILY | SSF47459 | IPR011598 | 22 | 95 | 0.00e-00 | Myc-type, basic helix-loop-helix (bHLH) domain |
NP_571032 | SUPERFAMILY | SSF55785 | IPR000014 | 109 | 175 | 0.00e-00 | PAS domain |
NP_571032 | SUPERFAMILY | SSF55785 | IPR000014 | 265 | 367 | 0.00e-00 | PAS domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_571032 | PF14598 | 3.1e-23 | PAS_11 | PAS domain |
NP_571032 | PF08447 | 6.1e-16 | PAS_3 | PAS fold |
NP_571032 | PF00010 | 1.6e-09 | HLH | Helix-loop-helix DNA-binding domain |
NP_571032 | PF00989 | 2.4e-07 | PAS | PAS fold |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_571032 | GO:0006351 | biological_process | transcription, DNA-templated |
NP_571032 | GO:0006355 | biological_process | regulation of transcription, DNA-templated |
NP_571032 | GO:0006974 | biological_process | cellular response to DNA damage stimulus |
NP_571032 | GO:0007165 | biological_process | signal transduction |
NP_571032 | GO:0032922 | biological_process | circadian regulation of gene expression |
NP_571032 | GO:0048511 | biological_process | rhythmic process |
NP_571032 | GO:0005634 | cellular_component | nucleus |
NP_571032 | GO:0005667 | cellular_component | transcription factor complex |
NP_571032 | GO:0005694 | cellular_component | chromosome |
NP_571032 | GO:0005737 | cellular_component | cytoplasm |
NP_571032 | GO:0001047 | molecular_function | core promoter binding |
NP_571032 | GO:0003677 | molecular_function | DNA binding |
NP_571032 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
NP_571032 | GO:0004402 | molecular_function | histone acetyltransferase activity |
NP_571032 | GO:0004871 | molecular_function | signal transducer activity |
NP_571032 | GO:0046983 | molecular_function | protein dimerization activity |