Basic Information | |||
Gene ID | 305999 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Nkx3-1; rCG_36969 | ||
Full Name | NK-3 transcription factor, locus 1 (Drosophila) | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | Q497B7 | UniGene | Rn.43468 |
PDB | NULL | OMIM | NULL |
KEGG | rno:305999 | UCSC | RGD:1305369 |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 10116.ENSRNOP00000020753 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000020753 | Gene3D | G3DSA:1.10.10.60 | IPR009057 | 122 | 188 | 3.20e-25 | Homeodomain-like |
ENSRNOP00000020753 | Pfam | PF00046 | IPR001356 | 127 | 183 | 3.20e-21 | Homeobox domain |
ENSRNOP00000020753 | PRINTS | PR00024 | IPR020479 | 148 | 159 | 4.40e-07 | Homeodomain, metazoa |
ENSRNOP00000020753 | PRINTS | PR00024 | IPR020479 | 163 | 173 | 4.40e-07 | Homeodomain, metazoa |
ENSRNOP00000020753 | PRINTS | PR00024 | IPR020479 | 173 | 182 | 4.40e-07 | Homeodomain, metazoa |
ENSRNOP00000020753 | ProSitePatterns | PS00027 | IPR017970 | 159 | 182 | - | Homeobox, conserved site |
ENSRNOP00000020753 | ProSiteProfiles | PS50071 | IPR001356 | 124 | 184 | 0.00e-00 | Homeobox domain |
ENSRNOP00000020753 | SMART | SM00389 | IPR001356 | 126 | 188 | 1.40e-25 | Homeobox domain |
ENSRNOP00000020753 | SUPERFAMILY | SSF46689 | IPR009057 | 113 | 185 | 0.00e-00 | Homeodomain-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000020753 | PF00046 | 2.2e-21 | Homeobox | Homeobox domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000020753 | GO:0045944 | biological_process | positive regulation of transcription from RNA polymerase II promoter |
ENSRNOP00000020753 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000020753 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000020753 | GO:0043565 | molecular_function | sequence-specific DNA binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
8364 | Xenopus tropicalis | 100038192 | 61853 | Nomascus leucogenys | 100605136 |
30611 | Otolemur garnettii | 100964897 | 39432 | Saimiri boliviensis | 101050593 |
8090 | Oryzias latipes | 101167461 | 9669 | Mustela putorius furo | 101691082 |
9483 | Callithrix jacchus | 100412294 | 8128 | Oreochromis niloticus | 100692555 |
10029 | Cricetulus griseus | 100752275 | 9597 | Pan paniscus | 100967944 |
9555 | Papio anubis | 101007449 | 10090 | Mus musculus | 18095 |
9646 | Ailuropoda melanoleuca | ENSAMEG00000002866 | 7955 | Danio rerio | ENSDARG00000078280 |
9371 | Echinops telfairi | ENSETEG00000018790 | 9595 | Gorilla gorilla | ENSGGOG00000014369 |
30608 | Microcebus murinus | ENSMICG00000011189 | 9978 | Ochotona princeps | ENSOPRG00000003179 |
132908 | Pteropus vampyrus | ENSPVAG00000005378 | 9305 | Sarcophilus harrisii | ENSSHAG00000015475 |
9606 | Homo sapiens | 4824 | 9544 | Macaca mulatta | 710591 |
28377 | Anolis carolinensis | ENSACAG00000026683 | 9615 | Canis familiaris | ENSCAFG00000009107 |
9358 | Choloepus hoffmanni | ENSCHOG00000011132 | 10141 | Cavia porcellus | ENSCPOG00000010557 |
10020 | Dipodomys ordii | ENSDORG00000013256 | 9796 | Equus caballus | ENSECAG00000001509 |
9365 | Erinaceus europaeus | ENSEEUG00000001113 | 9785 | Loxodonta africana | ENSLAFG00000008941 |
59463 | Myotis lucifugus | ENSMLUG00000006118 | 13616 | Monodelphis domestica | ENSMODG00000016789 |
9258 | Ornithorhynchus anatinus | ENSOANG00000008027 | 9813 | Procavia capensis | ENSPCAG00000016644 |
13735 | Pelodiscus sinensis | ENSPSIG00000017342 | 9598 | Pan troglodytes | ENSPTRG00000020081 |
42254 | Sorex araneus | ENSSARG00000001895 | 37347 | Tupaia belangeri | ENSTBEG00000002319 |
9478 | Tarsius syrichta | ENSTSYG00000007109 | 9739 | Tursiops truncatus | ENSTTRG00000012332 |
30538 | Vicugna pacos | ENSVPAG00000004503 | 8083 | Xiphophorus maculatus | ENSXMAG00000020262 |