Basic Information
Gene ID 312936 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Sox17; Sox17_predicted; rCG_30490
Full Name Protein Sox17
Organism Rattus norvegicus [10116]

Cross Reference
UniProt G3V923 UniGene Rn.7884
PDB NULL OMIM NULL
KEGG rno:312936 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000033962 Gene3D G3DSA:1.10.30.10 IPR009071 67 143 3.70e-34 High mobility group box domain
ENSRNOP00000033962 Pfam PF00505 IPR009071 68 136 2.60e-25 High mobility group box domain
ENSRNOP00000033962 Pfam PF12067 IPR021934 201 323 1.40e-16 Sox C-terminal transactivation domain
ENSRNOP00000033962 Pfam PF12067 IPR021934 332 421 7.70e-27 Sox C-terminal transactivation domain
ENSRNOP00000033962 ProSiteProfiles PS50118 IPR009071 68 136 0.00e-00 High mobility group box domain
ENSRNOP00000033962 ProSiteProfiles PS51516 IPR021934 278 422 0.00e-00 Sox C-terminal transactivation domain
ENSRNOP00000033962 SMART SM00398 IPR009071 67 137 5.00e-31 High mobility group box domain
ENSRNOP00000033962 SUPERFAMILY SSF47095 IPR009071 52 140 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000033962 PF12067 7.00649e-45 Sox_C_TAD Sox C-terminal transactivation domain
ENSRNOP00000033962 PF00505 1.8e-25 HMG_box HMG (high mobility group) box
ENSRNOP00000033962 PF09011 3.5e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000033962 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000033962 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000033962 GO:0007275 biological_process multicellular organismal development
ENSRNOP00000033962 GO:0007369 biological_process gastrulation
ENSRNOP00000033962 GO:0016055 biological_process Wnt signaling pathway
ENSRNOP00000033962 GO:0045893 biological_process positive regulation of transcription, DNA-templated
ENSRNOP00000033962 GO:0045944 biological_process positive regulation of transcription from RNA polymerase II promoter
ENSRNOP00000033962 GO:0005634 cellular_component nucleus
ENSRNOP00000033962 GO:0003677 molecular_function DNA binding
ENSRNOP00000033962 GO:0008013 molecular_function beta-catenin binding
ENSRNOP00000033962 GO:0043565 molecular_function sequence-specific DNA binding

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
13616 Monodelphis domestica 100030119 7425 Nasonia vitripennis 100120206
10224 Saccoglossus kowalevskii 100303486 9483 Callithrix jacchus 100396115
61853 Nomascus leucogenys 100591356 10029 Cricetulus griseus 100754082
34638 Metaseiulus occidentalis 100908412 31033 Takifugu rubripes 101080200
7897 Latimeria chalumnae 102363300 59463 Myotis lucifugus 102427708
10090 Mus musculus 20680 7029 Acyrthosiphon pisum 100165234
8090 Oryzias latipes 100304455 143995 Megachile rotundata 100876699
9597 Pan paniscus 100969672 9555 Papio anubis 101022699
39432 Saimiri boliviensis 101053885 9669 Mustela putorius furo 101683331
43179 Ictidomys tridecemlineatus 101966515 8083 Xiphophorus maculatus 102225699
7955 Danio rerio 30544 7227 Drosophila melanogaster 36575
9913 Bos taurus 534010 7668 Strongylocentrotus purpuratus 587141
9606 Homo sapiens 64321 9544 Macaca mulatta 697999
28377 Anolis carolinensis ENSACAG00000017977 9371 Echinops telfairi ENSETEG00000016915
69293 Gasterosteus aculeatus ENSGACG00000004347 9031 Gallus gallus ENSGALG00000028422
8049 Gadus morhua ENSGMOG00000005913 9103 Meleagris gallopavo ENSMGAG00000014195
30608 Microcebus murinus ENSMICG00000000709 9978 Ochotona princeps ENSOPRG00000007021
7757 Petromyzon marinus ENSPMAG00000009255 59729 Taeniopygia guttata ENSTGUG00000011034
30538 Vicugna pacos ENSVPAG00000005064 8364 Xenopus tropicalis 549080
9646 Ailuropoda melanoleuca ENSAMEG00000011673 9615 Canis familiaris ENSCAFG00000025327
10141 Cavia porcellus ENSCPOG00000000892 9796 Equus caballus ENSECAG00000009206
9595 Gorilla gorilla ENSGGOG00000023175 9785 Loxodonta africana ENSLAFG00000028829
9315 Macropus eugenii ENSMEUG00000011391 9986 Oryctolagus cuniculus ENSOCUG00000012651
30611 Otolemur garnettii ENSOGAG00000034932 9813 Procavia capensis ENSPCAG00000003188
9601 Pongo abelii ENSPPYG00000029608 132908 Pteropus vampyrus ENSPVAG00000009339
42254 Sorex araneus ENSSARG00000009573 99883 Tetraodon nigroviridis ENSTNIG00000017129