Basic Information | |||
Gene ID | 364081 ; ![]() ![]() | ||
Gene Name | Irf6; Irf6_predicted; rCG_20098 | ||
Full Name | Interferon regulatory factor 6 (Predicted) | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | D4AAV0 | UniGene | Rn.12385 |
PDB | NULL | OMIM | NULL |
KEGG | rno:364081 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000007333 | Gene3D | G3DSA:1.10.10.10 | IPR011991 | 5 | 114 | 4.30e-44 | Winged helix-turn-helix DNA-binding domain |
ENSRNOP00000007333 | Gene3D | G3DSA:2.60.200.10 | IPR017855 | 213 | 453 | 3.20e-94 | SMAD domain-like |
ENSRNOP00000007333 | Pfam | PF00605 | IPR001346 | 7 | 115 | 9.50e-48 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000007333 | Pfam | PF10401 | IPR019471 | 223 | 407 | 1.10e-64 | Interferon regulatory factor-3 |
ENSRNOP00000007333 | PRINTS | PR00267 | IPR001346 | 35 | 48 | 1.20e-26 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000007333 | PRINTS | PR00267 | IPR001346 | 53 | 70 | 1.20e-26 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000007333 | PRINTS | PR00267 | IPR001346 | 76 | 98 | 1.20e-26 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000007333 | PRINTS | PR00267 | IPR001346 | 9 | 28 | 1.20e-26 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000007333 | ProSitePatterns | PS00601 | IPR019817 | 28 | 61 | - | Interferon regulatory factor, conserved site |
ENSRNOP00000007333 | ProSiteProfiles | PS51507 | IPR001346 | 7 | 115 | 0.00e-00 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000007333 | SMART | SM00348 | IPR001346 | 3 | 116 | 6.80e-62 | Interferon regulatory factor DNA-binding domain |
ENSRNOP00000007333 | SUPERFAMILY | SSF49879 | IPR008984 | 215 | 444 | 0.00e-00 | SMAD/FHA domain |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000007333 | PF00605 | 0 | IRF | Interferon regulatory factor transcription factor |
ENSRNOP00000007333 | PF10401 | 0 | IRF-3 | Interferon-regulatory factor 3 |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000007333 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000007333 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000007333 | GO:0005737 | cellular_component | cytoplasm |
ENSRNOP00000007333 | GO:0000975 | molecular_function | regulatory region DNA binding |
ENSRNOP00000007333 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9483 | Callithrix jacchus | 100402804 | 9646 | Ailuropoda melanoleuca | 100466098 |
9103 | Meleagris gallopavo | 100542404 | 61853 | Nomascus leucogenys | 100594750 |
10141 | Cavia porcellus | 100729739 | 9597 | Pan paniscus | 100985082 |
9555 | Papio anubis | 101002987 | 39432 | Saimiri boliviensis | 101039164 |
9595 | Gorilla gorilla | 101149796 | 9669 | Mustela putorius furo | 101670006 |
8083 | Xiphophorus maculatus | 102225056 | 7897 | Latimeria chalumnae | 102357042 |
13735 | Pelodiscus sinensis | 102460672 | 10029 | Cricetulus griseus | 100761633 |
9606 | Homo sapiens | 3663 | 9823 | Sus scrofa | 397521 |
9615 | Canis familiaris | 480015 | 9544 | Macaca mulatta | 712958 |
9358 | Choloepus hoffmanni | ENSCHOG00000010399 | 9361 | Dasypus novemcinctus | ENSDNOG00000001694 |
10020 | Dipodomys ordii | ENSDORG00000008891 | 9796 | Equus caballus | ENSECAG00000009902 |
9365 | Erinaceus europaeus | ENSEEUG00000003813 | 9371 | Echinops telfairi | ENSETEG00000008368 |
9685 | Felis catus | ENSFCAG00000015138 | 69293 | Gasterosteus aculeatus | ENSGACG00000000695 |
9031 | Gallus gallus | ENSGALG00000028368 | 8049 | Gadus morhua | ENSGMOG00000007988 |
9785 | Loxodonta africana | ENSLAFG00000001374 | 9315 | Macropus eugenii | ENSMEUG00000014941 |
30608 | Microcebus murinus | ENSMICG00000001233 | 59463 | Myotis lucifugus | ENSMLUG00000004509 |
13616 | Monodelphis domestica | ENSMODG00000002539 | 9258 | Ornithorhynchus anatinus | ENSOANG00000011449 |
9986 | Oryctolagus cuniculus | ENSOCUG00000004035 | 30611 | Otolemur garnettii | ENSOGAG00000009608 |
8128 | Oreochromis niloticus | ENSONIG00000018961 | 9978 | Ochotona princeps | ENSOPRG00000014295 |
8090 | Oryzias latipes | ENSORLG00000000511 | 9813 | Procavia capensis | ENSPCAG00000006456 |
9601 | Pongo abelii | ENSPPYG00000000253 | 132908 | Pteropus vampyrus | ENSPVAG00000004865 |
42254 | Sorex araneus | ENSSARG00000006061 | 9305 | Sarcophilus harrisii | ENSSHAG00000001714 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000028204 | 37347 | Tupaia belangeri | ENSTBEG00000017451 |
99883 | Tetraodon nigroviridis | ENSTNIG00000014635 | 31033 | Takifugu rubripes | ENSTRUG00000006951 |
9478 | Tarsius syrichta | ENSTSYG00000010982 | 9739 | Tursiops truncatus | ENSTTRG00000001121 |
30538 | Vicugna pacos | ENSVPAG00000010247 | 8364 | Xenopus tropicalis | ENSXETG00000018661 |