Basic Information | |||
Gene ID | 367944 ; Check Expression Profles ; Check TFs & Targets Binding | ||
Gene Name | Zic3; RGD1561261_predicted; rCG_49936 | ||
Full Name | Protein Zic3 | ||
Organism | Rattus norvegicus [10116] |
Cross Reference | |||
UniProt | F1M4Q0 | UniGene | Rn.64713 |
PDB | NULL | OMIM | NULL |
KEGG | rno:367944 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | NULL |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
ENSRNOP00000019431 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 264 | 291 | 1.00e-05 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000019431 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 292 | 329 | 1.50e-24 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000019431 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 330 | 352 | 2.60e-17 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000019431 | Gene3D | G3DSA:3.30.160.60 | IPR013087 | 353 | 381 | 1.50e-12 | Zinc finger C2H2-type/integrase DNA-binding domain |
ENSRNOP00000019431 | Pfam | PF00096 | IPR007087 | 361 | 381 | 3.30e-05 | Zinc finger, C2H2 |
ENSRNOP00000019431 | ProSitePatterns | PS00028 | IPR007087 | 303 | 325 | - | Zinc finger, C2H2 |
ENSRNOP00000019431 | ProSitePatterns | PS00028 | IPR007087 | 333 | 355 | - | Zinc finger, C2H2 |
ENSRNOP00000019431 | ProSiteProfiles | PS50157 | IPR007087 | 273 | 300 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000019431 | ProSiteProfiles | PS50157 | IPR007087 | 301 | 330 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000019431 | ProSiteProfiles | PS50157 | IPR007087 | 331 | 360 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000019431 | ProSiteProfiles | PS50157 | IPR007087 | 361 | 381 | 0.00e-00 | Zinc finger, C2H2 |
ENSRNOP00000019431 | SMART | SM00355 | IPR015880 | 234 | 259 | 2.30e-01 | Zinc finger, C2H2-like |
ENSRNOP00000019431 | SMART | SM00355 | IPR015880 | 268 | 295 | 2.10e-02 | Zinc finger, C2H2-like |
ENSRNOP00000019431 | SMART | SM00355 | IPR015880 | 301 | 325 | 7.00e-07 | Zinc finger, C2H2-like |
ENSRNOP00000019431 | SMART | SM00355 | IPR015880 | 331 | 355 | 5.50e-06 | Zinc finger, C2H2-like |
ENSRNOP00000019431 | SMART | SM00355 | IPR015880 | 361 | 381 | 4.70e-03 | Zinc finger, C2H2-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
ENSRNOP00000019431 | PF00096 | 3.1e-20 | zf-C2H2 | Zinc finger, C2H2 type |
ENSRNOP00000019431 | PF13465 | 1.2e-19 | zf-H2C2_2 | Zinc-finger double domain |
ENSRNOP00000019431 | PF13894 | 1.1e-14 | zf-C2H2_4 | C2H2-type zinc finger |
ENSRNOP00000019431 | PF12171 | 1e-09 | zf-C2H2_jaz | Zinc-finger double-stranded RNA-binding |
ENSRNOP00000019431 | PF12874 | 5.4e-05 | zf-met | Zinc-finger of C2H2 type |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
ENSRNOP00000019431 | GO:0006351 | biological_process | transcription, DNA-templated |
ENSRNOP00000019431 | GO:0030154 | biological_process | cell differentiation |
ENSRNOP00000019431 | GO:0045893 | biological_process | positive regulation of transcription, DNA-templated |
ENSRNOP00000019431 | GO:0005634 | cellular_component | nucleus |
ENSRNOP00000019431 | GO:0005737 | cellular_component | cytoplasm |
ENSRNOP00000019431 | GO:0003677 | molecular_function | DNA binding |
ENSRNOP00000019431 | GO:0003700 | molecular_function | sequence-specific DNA binding transcription factor activity |
ENSRNOP00000019431 | GO:0046872 | molecular_function | metal ion binding |
Orthologs | |||||
TAXID | Organism | Gene ID | TAXID | Organism | Gene ID |
9823 | Sus scrofa | 100156863 | 9986 | Oryctolagus cuniculus | 100347605 |
9483 | Callithrix jacchus | 100394487 | 28377 | Anolis carolinensis | 100562807 |
30611 | Otolemur garnettii | 100963863 | 9597 | Pan paniscus | 100972338 |
9555 | Papio anubis | 101015377 | 8083 | Xiphophorus maculatus | 102233133 |
7897 | Latimeria chalumnae | 102347692 | 10090 | Mus musculus | 22774 |
7955 | Danio rerio | 30096 | 10224 | Saccoglossus kowalevskii | 100302714 |
9646 | Ailuropoda melanoleuca | 100467160 | 8128 | Oreochromis niloticus | 100697514 |
10029 | Cricetulus griseus | 100764121 | 39432 | Saimiri boliviensis | 101048715 |
9595 | Gorilla gorilla | 101126327 | 59463 | Myotis lucifugus | 102430996 |
13735 | Pelodiscus sinensis | 102461291 | 9615 | Canis familiaris | 492171 |
7070 | Tribolium castaneum | 656812 | 9031 | Gallus gallus | ENSGALG00000006497 |
9315 | Macropus eugenii | ENSMEUG00000014290 | 9544 | Macaca mulatta | ENSMMUG00000002023 |
13616 | Monodelphis domestica | ENSMODG00000007718 | 9978 | Ochotona princeps | ENSOPRG00000011909 |
9813 | Procavia capensis | ENSPCAG00000008210 | 9601 | Pongo abelii | ENSPPYG00000005472 |
9598 | Pan troglodytes | ENSPTRG00000015501 | 132908 | Pteropus vampyrus | ENSPVAG00000011652 |
37347 | Tupaia belangeri | ENSTBEG00000012996 | 59729 | Taeniopygia guttata | ENSTGUG00000002155 |
8364 | Xenopus tropicalis | 448197 | 9913 | Bos taurus | 541035 |
7668 | Strongylocentrotus purpuratus | 578589 | 10141 | Cavia porcellus | ENSCPOG00000002374 |
9361 | Dasypus novemcinctus | ENSDNOG00000006192 | 10020 | Dipodomys ordii | ENSDORG00000014318 |
9796 | Equus caballus | ENSECAG00000020355 | 9365 | Erinaceus europaeus | ENSEEUG00000013747 |
9371 | Echinops telfairi | ENSETEG00000018846 | 9685 | Felis catus | ENSFCAG00000025684 |
69293 | Gasterosteus aculeatus | ENSGACG00000017212 | 8049 | Gadus morhua | ENSGMOG00000004438 |
9785 | Loxodonta africana | ENSLAFG00000007048 | 30608 | Microcebus murinus | ENSMICG00000010339 |
9669 | Mustela putorius furo | ENSMPUG00000001786 | 61853 | Nomascus leucogenys | ENSNLEG00000003005 |
9258 | Ornithorhynchus anatinus | ENSOANG00000007364 | 8090 | Oryzias latipes | ENSORLG00000001654 |
42254 | Sorex araneus | ENSSARG00000012492 | 9305 | Sarcophilus harrisii | ENSSHAG00000015091 |
43179 | Ictidomys tridecemlineatus | ENSSTOG00000000952 | 99883 | Tetraodon nigroviridis | ENSTNIG00000016841 |
31033 | Takifugu rubripes | ENSTRUG00000003550 | 9478 | Tarsius syrichta | ENSTSYG00000003356 |
9739 | Tursiops truncatus | ENSTTRG00000003415 |
Paralogs | |||
361095 |