Basic Information
Gene ID 378723
Gene Name sox2; zgc:65860, zgc:77389
Full Name Transcription factor Sox-2
Organism Danio rerio [7955]

Cross Reference
UniProt Q6P0E1 UniGene Dr.5379
PDB NULL OMIM NULL
KEGG dre:378723 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 7955.ENSDARP00000095266

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
NP_998283 Gene3D G3DSA:1.10.30.10 IPR009071 37 116 3.00e-41 High mobility group box domain
NP_998283 Pfam PF00505 IPR009071 38 106 4.40e-27 High mobility group box domain
NP_998283 Pfam PF12336 IPR022097 107 197 2.80e-29 Transcription factor SOX
NP_998283 ProSiteProfiles PS50118 IPR009071 38 106 0.00e-00 High mobility group box domain
NP_998283 SMART SM00398 IPR009071 37 107 3.60e-31 High mobility group box domain
NP_998283 SUPERFAMILY SSF47095 IPR009071 26 110 0.00e-00 High mobility group box domain

Pfam Annotation
Protein Pfam ID E.value Name Description
NP_998283 PF12336 2.8e-29 SOXp SOX transcription factor
NP_998283 PF00505 2.6e-27 HMG_box HMG (high mobility group) box
NP_998283 PF09011 1.5e-11 HMG_box_2 HMG-box domain

Gene Ontology Annotation
Protein Entry Name Space Description
NP_998283 GO:0006351 biological_process transcription, DNA-templated
NP_998283 GO:0006355 biological_process regulation of transcription, DNA-templated
NP_998283 GO:0007275 biological_process multicellular organismal development
NP_998283 GO:0005634 cellular_component nucleus
NP_998283 GO:0003677 molecular_function DNA binding
NP_998283 GO:0043565 molecular_function sequence-specific DNA binding