Basic Information | |||
Gene ID | 554561 | ||
Gene Name | traf6; si:dkey-56p7.3, zgc:63704 | ||
Full Name | TNF receptor-associated factor 6 | ||
Organism | Danio rerio [7955] |
Cross Reference | |||
UniProt | Q6IWL4 | UniGene | Dr.74618 |
PDB | NULL | OMIM | NULL |
KEGG | dre:554561 | UCSC | NULL |
Protein Interactions | |
DIP | NULL |
IntAct | NULL |
MINT | NULL |
STRING | 7955.ENSDARP00000036715 |
Ensembl/RefSeq | Transcript ID | Protein ID | Gene ID |
ENSEMBL | |||
REFSEQ |
InterPro Annotation | |||||||
Protein | Program | Term | IPRS | Start | End | Score | Description |
NP_001038217 | Gene3D | G3DSA:3.30.40.10 | IPR013083 | 62 | 141 | 9.90e-17 | Zinc finger, RING/FYVE/PHD-type |
NP_001038217 | Gene3D | G3DSA:3.90.890.10 | IPR013323 | 142 | 178 | 3.80e-06 | SIAH-type domain |
NP_001038217 | PANTHER | PTHR10131:SF48 | IPR027139 | 1 | 542 | 0.00e-00 | TNF receptor-associated factor 6 |
NP_001038217 | Pfam | PF00917 | IPR002083 | 382 | 520 | 9.10e-19 | MATH |
NP_001038217 | PIRSF | PIRSF015614 | IPR012227 | 10 | 528 | 1.20e-263 | TNF receptor-associated factor TRAF |
NP_001038217 | ProSitePatterns | PS00518 | IPR017907 | 86 | 95 | - | Zinc finger, RING-type, conserved site |
NP_001038217 | ProSiteProfiles | PS50089 | IPR001841 | 71 | 110 | 0.00e-00 | Zinc finger, RING-type |
NP_001038217 | ProSiteProfiles | PS50144 | IPR002083 | 374 | 520 | 0.00e-00 | MATH |
NP_001038217 | ProSiteProfiles | PS50145 | IPR001293 | 205 | 259 | 0.00e-00 | Zinc finger, TRAF-type |
NP_001038217 | SMART | SM00061 | IPR002083 | 379 | 503 | 2.40e-10 | MATH |
NP_001038217 | SMART | SM00184 | IPR001841 | 71 | 109 | 8.90e-12 | Zinc finger, RING-type |
NP_001038217 | SUPERFAMILY | SSF49599 | IPR008974 | 130 | 199 | 0.00e-00 | TRAF-like |
NP_001038217 | SUPERFAMILY | SSF49599 | IPR008974 | 193 | 270 | 0.00e-00 | TRAF-like |
NP_001038217 | SUPERFAMILY | SSF49599 | IPR008974 | 372 | 521 | 0.00e-00 | TRAF-like |
Pfam Annotation | ||||
Protein | Pfam ID | E.value | Name | Description |
NP_001038217 | PF00917 | 1.5e-19 | MATH | MATH domain |
NP_001038217 | PF02176 | 2.9e-14 | zf-TRAF | TRAF-type zinc finger |
NP_001038217 | PF13923 | 3e-10 | zf-C3HC4_2 | Zinc finger, C3HC4 type (RING finger) |
NP_001038217 | PF13639 | 6.8e-10 | zf-RING_2 | Ring finger domain |
NP_001038217 | PF00097 | 9e-09 | zf-C3HC4 | Zinc finger, C3HC4 type (RING finger) |
NP_001038217 | PF13920 | 1.6e-07 | zf-C3HC4_3 | Zinc finger, C3HC4 type (RING finger) |
NP_001038217 | PF14634 | 4.5e-06 | zf-RING_5 | zinc-RING finger domain |
NP_001038217 | PF15227 | 9e-06 | zf-C3HC4_4 | zinc finger of C3HC4-type, RING |
NP_001038217 | PF00751 | 0.0006 | DM | DM DNA binding domain |
Gene Ontology Annotation | |||
Protein | Entry | Name Space | Description |
NP_001038217 | GO:0000209 | biological_process | protein polyubiquitination |
NP_001038217 | GO:0001503 | biological_process | ossification |
NP_001038217 | GO:0007250 | biological_process | activation of NF-kappaB-inducing kinase activity |
NP_001038217 | GO:0031666 | biological_process | positive regulation of lipopolysaccharide-mediated signaling pathway |
NP_001038217 | GO:0042981 | biological_process | regulation of apoptotic process |
NP_001038217 | GO:0043123 | biological_process | positive regulation of I-kappaB kinase/NF-kappaB signaling |
NP_001038217 | GO:0043507 | biological_process | positive regulation of JUN kinase activity |
NP_001038217 | GO:0045672 | biological_process | positive regulation of osteoclast differentiation |
NP_001038217 | GO:0048468 | biological_process | cell development |
NP_001038217 | GO:0050852 | biological_process | T cell receptor signaling pathway |
NP_001038217 | GO:0051092 | biological_process | positive regulation of NF-kappaB transcription factor activity |
NP_001038217 | GO:0051865 | biological_process | protein autoubiquitination |
NP_001038217 | GO:0070498 | biological_process | interleukin-1-mediated signaling pathway |
NP_001038217 | GO:0070534 | biological_process | protein K63-linked ubiquitination |
NP_001038217 | GO:0005737 | cellular_component | cytoplasm |
NP_001038217 | GO:0005811 | cellular_component | lipid particle |
NP_001038217 | GO:0005938 | cellular_component | cell cortex |
NP_001038217 | GO:0004842 | molecular_function | ubiquitin-protein ligase activity |
NP_001038217 | GO:0004871 | molecular_function | signal transducer activity |
NP_001038217 | GO:0008270 | molecular_function | zinc ion binding |