Basic Information
Gene ID 579474
Gene Name LOC579474
Full Name PREDICTED: general transcription factor IIF subunit 2-like[Strongylocentrotus purpuratus].
Organism Strongylocentrotus purpuratus [7668]

Cross Reference
UniProt NULL UniGene NULL
PDB NULL OMIM NULL
KEGG NULL UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
XP_784682 Gene3D G3DSA:1.10.10.10 IPR011991 158 190 1.50e-11 Winged helix-turn-helix DNA-binding domain
XP_784682 PANTHER PTHR10445 IPR003196 4 197 0.00e-00 Transcription initiation factor IIF, beta subunit
XP_784682 Pfam PF02270 IPR003196 159 188 1.90e-07 Transcription initiation factor IIF, beta subunit
XP_784682 Pfam PF02270 IPR003196 5 92 4.40e-17 Transcription initiation factor IIF, beta subunit
XP_784682 Pfam PF02270 IPR003196 91 155 4.00e-10 Transcription initiation factor IIF, beta subunit
XP_784682 SUPERFAMILY SSF50916 IPR011039 4 113 0.00e-00 Transcription Factor IIF, Rap30/Rap74, interaction

Pfam Annotation
Protein Pfam ID E.value Name Description
XP_784682 PF02270 3.9e-37 TFIIF_beta Transcription initiation factor IIF, beta subunit

Gene Ontology Annotation
Protein Entry Name Space Description
XP_784682 GO:0006355 biological_process regulation of transcription, DNA-templated
XP_784682 GO:0006367 biological_process transcription initiation from RNA polymerase II promoter
XP_784682 GO:0005674 cellular_component transcription factor TFIIF complex
XP_784682 GO:0003677 molecular_function DNA binding
XP_784682 GO:0005524 molecular_function ATP binding
XP_784682 GO:0008026 molecular_function ATP-dependent helicase activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7029 Acyrthosiphon pisum 100167421 9601 Pongo abelii 100447986
30195 Bombus terrestris 100647152 8128 Oreochromis niloticus 100699655
143995 Megachile rotundata 100878930 9555 Papio anubis 101004183
9669 Mustela putorius furo 101674619 43179 Ictidomys tridecemlineatus 101957408
7227 Drosophila melanogaster 41290 7460 Apis mellifera 551470
9796 Equus caballus 100050971 7425 Nasonia vitripennis 100119177
9986 Oryctolagus cuniculus 100339233 9646 Ailuropoda melanoleuca 100480731
9785 Loxodonta africana 100664948 10141 Cavia porcellus 100715926
132113 Bombus impatiens 100740836 10029 Cricetulus griseus 100768332
7463 Apis florea 100864480 30611 Otolemur garnettii 100941136
9597 Pan paniscus 100986478 39432 Saimiri boliviensis 101045078
9685 Felis catus 101083822 9595 Gorilla gorilla 101144785
8090 Oryzias latipes 101157760 9615 Canis familiaris 102152240
59463 Myotis lucifugus 102429913 9598 Pan troglodytes 741868
9358 Choloepus hoffmanni ENSCHOG00000007391 7955 Danio rerio ENSDARG00000006816
9371 Echinops telfairi ENSETEG00000000072 9031 Gallus gallus ENSGALG00000016974
9315 Macropus eugenii ENSMEUG00000002800 9103 Meleagris gallopavo ENSMGAG00000014989
9258 Ornithorhynchus anatinus ENSOANG00000022461 7757 Petromyzon marinus ENSPMAG00000004986
99883 Tetraodon nigroviridis ENSTNIG00000004440 31033 Takifugu rubripes ENSTRUG00000018005
9739 Tursiops truncatus ENSTTRG00000002729 8083 Xiphophorus maculatus ENSXMAG00000001717
7070 Tribolium castaneum 656515 10116 Rattus norvegicus 81674
9365 Erinaceus europaeus ENSEEUG00000011085 69293 Gasterosteus aculeatus ENSGACG00000015208
8049 Gadus morhua ENSGMOG00000018015 9544 Macaca mulatta ENSMMUG00000012634
13616 Monodelphis domestica ENSMODG00000025484