Basic Information
Gene ID 60447 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Clock
Full Name Circadian locomoter output cycles protein kaput
Organism Rattus norvegicus [10116]

Cross Reference
UniProt Q9WVS9 UniGene Rn.205839
PDB NULL OMIM NULL
KEGG rno:60447 UCSC RGD:620271

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING NULL

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000002976 Gene3D G3DSA:4.10.280.10 IPR011598 35 85 5.80e-12 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000002976 Pfam PF00010 IPR011598 35 83 5.00e-09 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000002976 Pfam PF00989 IPR013767 110 177 6.30e-08 PAS fold
ENSRNOP00000002976 PRINTS PR00785 IPR001067 100 123 2.40e-12 Nuclear translocator
ENSRNOP00000002976 PRINTS PR00785 IPR001067 275 292 2.40e-12 Nuclear translocator
ENSRNOP00000002976 PRINTS PR00785 IPR001067 49 64 2.40e-12 Nuclear translocator
ENSRNOP00000002976 ProSiteProfiles PS50112 IPR000014 107 177 0.00e-00 PAS domain
ENSRNOP00000002976 ProSiteProfiles PS50112 IPR000014 285 332 0.00e-00 PAS domain
ENSRNOP00000002976 ProSiteProfiles PS50888 IPR011598 34 84 0.00e-00 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000002976 SMART SM00086 IPR001610 336 379 3.00e-09 PAC motif
ENSRNOP00000002976 SMART SM00091 IPR000014 109 175 3.70e-08 PAS domain
ENSRNOP00000002976 SMART SM00091 IPR000014 264 330 1.30e-06 PAS domain
ENSRNOP00000002976 SMART SM00353 IPR011598 40 90 4.10e-14 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000002976 SUPERFAMILY SSF47459 IPR011598 31 104 0.00e-00 Myc-type, basic helix-loop-helix (bHLH) domain
ENSRNOP00000002976 SUPERFAMILY SSF55785 IPR000014 118 179 0.00e-00 PAS domain
ENSRNOP00000002976 SUPERFAMILY SSF55785 IPR000014 274 376 0.00e-00 PAS domain

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000002976 PF14598 9.8e-24 PAS_11 PAS domain
ENSRNOP00000002976 PF08447 6.5e-15 PAS_3 PAS fold
ENSRNOP00000002976 PF00989 1e-10 PAS PAS fold
ENSRNOP00000002976 PF00010 1.9e-09 HLH Helix-loop-helix DNA-binding domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000002976 GO:0006351 biological_process transcription, DNA-templated
ENSRNOP00000002976 GO:0006355 biological_process regulation of transcription, DNA-templated
ENSRNOP00000002976 GO:0006974 biological_process cellular response to DNA damage stimulus
ENSRNOP00000002976 GO:0007165 biological_process signal transduction
ENSRNOP00000002976 GO:0032922 biological_process circadian regulation of gene expression
ENSRNOP00000002976 GO:0048511 biological_process rhythmic process
ENSRNOP00000002976 GO:0005634 cellular_component nucleus
ENSRNOP00000002976 GO:0005667 cellular_component transcription factor complex
ENSRNOP00000002976 GO:0005694 cellular_component chromosome
ENSRNOP00000002976 GO:0005737 cellular_component cytoplasm
ENSRNOP00000002976 GO:0001047 molecular_function core promoter binding
ENSRNOP00000002976 GO:0003677 molecular_function DNA binding
ENSRNOP00000002976 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity
ENSRNOP00000002976 GO:0004402 molecular_function histone acetyltransferase activity
ENSRNOP00000002976 GO:0004871 molecular_function signal transducer activity
ENSRNOP00000002976 GO:0046983 molecular_function protein dimerization activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
9986 Oryctolagus cuniculus 100349684 61853 Nomascus leucogenys 100606130
8128 Oreochromis niloticus 100690629 7463 Apis florea 100869092
39432 Saimiri boliviensis 101035173 9685 Felis catus 101088483
9669 Mustela putorius furo 101674500 7029 Acyrthosiphon pisum 100163752
9483 Callithrix jacchus 100407407 9597 Pan paniscus 100986920
9555 Papio anubis 101017477 43179 Ictidomys tridecemlineatus 101958731
13735 Pelodiscus sinensis 102444504 7955 Danio rerio 352927
7227 Drosophila melanogaster 38872 7460 Apis mellifera 411534
7668 Strongylocentrotus purpuratus 576191 28377 Anolis carolinensis ENSACAG00000009335
9361 Dasypus novemcinctus ENSDNOG00000018101 10020 Dipodomys ordii ENSDORG00000008014
9796 Equus caballus ENSECAG00000006331 9371 Echinops telfairi ENSETEG00000015604
9595 Gorilla gorilla ENSGGOG00000005753 8049 Gadus morhua ENSGMOG00000004825
30608 Microcebus murinus ENSMICG00000000320 59463 Myotis lucifugus ENSMLUG00000010007
9258 Ornithorhynchus anatinus ENSOANG00000003801 30611 Otolemur garnettii ENSOGAG00000012464
8090 Oryzias latipes ENSORLG00000004495 7757 Petromyzon marinus ENSPMAG00000002704
42254 Sorex araneus ENSSARG00000002584 9305 Sarcophilus harrisii ENSSHAG00000005555
9823 Sus scrofa ENSSSCG00000008909 59729 Taeniopygia guttata ENSTGUG00000007513
31033 Takifugu rubripes ENSTRUG00000015488 9739 Tursiops truncatus ENSTTRG00000000960
8364 Xenopus tropicalis ENSXETG00000021064 8083 Xiphophorus maculatus ENSXMAG00000016928
7070 Tribolium castaneum 655469 9606 Homo sapiens 9575
9646 Ailuropoda melanoleuca ENSAMEG00000018420 9913 Bos taurus ENSBTAG00000044044
9615 Canis familiaris ENSCAFG00000002140 9358 Choloepus hoffmanni ENSCHOG00000004103
10141 Cavia porcellus ENSCPOG00000011807 9365 Erinaceus europaeus ENSEEUG00000000876
69293 Gasterosteus aculeatus ENSGACG00000015939 9031 Gallus gallus ENSGALG00000013793
7897 Latimeria chalumnae ENSLACG00000016260 9785 Loxodonta africana ENSLAFG00000009558
9315 Macropus eugenii ENSMEUG00000005481 9544 Macaca mulatta ENSMMUG00000001919
9978 Ochotona princeps ENSOPRG00000005292 9601 Pongo abelii ENSPPYG00000014762
132908 Pteropus vampyrus ENSPVAG00000008960 37347 Tupaia belangeri ENSTBEG00000002540
99883 Tetraodon nigroviridis ENSTNIG00000017652 30538 Vicugna pacos ENSVPAG00000006438