Basic Information
Gene ID 66019 ; Check Expression Profles ; Check TFs & Targets Binding
Gene Name Cdx2; cdx2; rCG_42572
Full Name CDX2 protein
Organism Rattus norvegicus [10116]

Cross Reference
UniProt Q9ESV7 UniGene Rn.64495
PDB NULL OMIM NULL
KEGG rno:66019 UCSC NULL

Protein Interactions
DIP NULL
IntAct NULL
MINT NULL
STRING 10116.ENSRNOP00000045045

Ensembl/RefSeq
Transcript ID
Protein ID
Gene ID
ENSEMBL
REFSEQ
REFSEQ

InterPro Annotation
Protein Program Term IPRS Start End Score Description
ENSRNOP00000045045 Gene3D G3DSA:1.10.10.60 IPR009057 169 246 2.10e-26 Homeodomain-like
ENSRNOP00000045045 Pfam PF00046 IPR001356 187 242 7.20e-21 Homeobox domain
ENSRNOP00000045045 Pfam PF04731 IPR006820 13 178 2.10e-45 Caudal-like activation domain
ENSRNOP00000045045 PRINTS PR00024 IPR020479 207 218 3.10e-06 Homeodomain, metazoa
ENSRNOP00000045045 PRINTS PR00024 IPR020479 222 232 3.10e-06 Homeodomain, metazoa
ENSRNOP00000045045 PRINTS PR00024 IPR020479 232 241 3.10e-06 Homeodomain, metazoa
ENSRNOP00000045045 PRINTS PR00031 IPR000047 214 223 5.70e-08 Helix-turn-helix motif
ENSRNOP00000045045 PRINTS PR00031 IPR000047 223 239 5.70e-08 Helix-turn-helix motif
ENSRNOP00000045045 ProSitePatterns PS00027 IPR017970 218 241 - Homeobox, conserved site
ENSRNOP00000045045 ProSiteProfiles PS50071 IPR001356 183 243 0.00e-00 Homeobox domain
ENSRNOP00000045045 SMART SM00389 IPR001356 185 247 2.80e-28 Homeobox domain
ENSRNOP00000045045 SUPERFAMILY SSF46689 IPR009057 172 245 0.00e-00 Homeodomain-like

Pfam Annotation
Protein Pfam ID E.value Name Description
ENSRNOP00000045045 PF04731 1.4013e-45 Caudal_act Caudal like protein activation region
ENSRNOP00000045045 PF00046 4.2e-21 Homeobox Homeobox domain

Gene Ontology Annotation
Protein Entry Name Space Description
ENSRNOP00000045045 GO:0005634 cellular_component nucleus
ENSRNOP00000045045 GO:0000976 molecular_function transcription regulatory region sequence-specific DNA binding
ENSRNOP00000045045 GO:0003700 molecular_function sequence-specific DNA binding transcription factor activity

Orthologs
TAXID Organism Gene ID TAXID Organism Gene ID
7425 Nasonia vitripennis 100116315 9986 Oryctolagus cuniculus 100357426
10141 Cavia porcellus 100720187 143995 Megachile rotundata 100879814
34638 Metaseiulus occidentalis 100898561 9597 Pan paniscus 100978486
39432 Saimiri boliviensis 101037292 9595 Gorilla gorilla 101131069
8090 Oryzias latipes 101170103 7897 Latimeria chalumnae 102345925
9606 Homo sapiens 1046 10090 Mus musculus 12592
7227 Drosophila melanogaster 35341 9103 Meleagris gallopavo 100549688
9785 Loxodonta africana 100671575 10029 Cricetulus griseus 100762482
9305 Sarcophilus harrisii 100926556 9555 Papio anubis 101003360
9544 Macaca mulatta 711094 28377 Anolis carolinensis ENSACAG00000003334
7955 Danio rerio ENSDARG00000087811 10020 Dipodomys ordii ENSDORG00000005495
9796 Equus caballus ENSECAG00000000707 9371 Echinops telfairi ENSETEG00000018589
9315 Macropus eugenii ENSMEUG00000003391 9669 Mustela putorius furo ENSMPUG00000005092
30611 Otolemur garnettii ENSOGAG00000026117 8128 Oreochromis niloticus ENSONIG00000002817
132908 Pteropus vampyrus ENSPVAG00000011522 9823 Sus scrofa ENSSSCG00000009317
43179 Ictidomys tridecemlineatus ENSSTOG00000002918 8083 Xiphophorus maculatus ENSXMAG00000013191
9646 Ailuropoda melanoleuca ENSAMEG00000002400 9913 Bos taurus ENSBTAG00000001819
9615 Canis familiaris ENSCAFG00000017189 7719 Ciona intestinalis ENSCING00000007334
9483 Callithrix jacchus ENSCJAG00000019398 9365 Erinaceus europaeus ENSEEUG00000005045
9685 Felis catus ENSFCAG00000026699 69293 Gasterosteus aculeatus ENSGACG00000017113
9031 Gallus gallus ENSGALG00000027764 8049 Gadus morhua ENSGMOG00000003732
30608 Microcebus murinus ENSMICG00000000751 59463 Myotis lucifugus ENSMLUG00000002563
61853 Nomascus leucogenys ENSNLEG00000000365 9978 Ochotona princeps ENSOPRG00000003043
9813 Procavia capensis ENSPCAG00000010752 9601 Pongo abelii ENSPPYG00000005242
13735 Pelodiscus sinensis ENSPSIG00000012291 9598 Pan troglodytes ENSPTRG00000005738
37347 Tupaia belangeri ENSTBEG00000006155 59729 Taeniopygia guttata ENSTGUG00000011606
99883 Tetraodon nigroviridis ENSTNIG00000000119 31033 Takifugu rubripes ENSTRUG00000011401
8364 Xenopus tropicalis ENSXETG00000010282